Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00360 and H281DRAFT_00361 are separated by 46 nucleotidesH281DRAFT_00361 and H281DRAFT_00362 are separated by 147 nucleotidesH281DRAFT_00362 and H281DRAFT_00363 are separated by 172 nucleotidesH281DRAFT_00363 and H281DRAFT_00364 are separated by 84 nucleotides H281DRAFT_00360: H281DRAFT_00360 - hypothetical protein, at 393,548 to 394,756 _00360 H281DRAFT_00361: H281DRAFT_00361 - (3S)-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) / enoyl-CoA hydratase domain (from data), at 394,803 to 396,923 _00361 H281DRAFT_00362: H281DRAFT_00362 - transcriptional regulator, LysR family, at 397,071 to 397,979 _00362 H281DRAFT_00363: H281DRAFT_00363 - hypothetical protein, at 398,152 to 398,340 _00363 H281DRAFT_00364: H281DRAFT_00364 - hypothetical protein, at 398,425 to 398,805 _00364
Group Condition H281DRAFT_00360 H281DRAFT_00361 H281DRAFT_00362 H281DRAFT_00363 H281DRAFT_00364
carbon source adipate (C) -4.0 -3.6 -3.8 N.D. N.D.
carbon source adipate (C) -4.5 -3.7 -1.8 N.D. N.D.
carbon source Sebacic (C) -2.0 -2.6 -0.6 N.D. N.D.
carbon source Dodecandioic (C) -1.3 -2.0 -1.2 N.D. N.D.
carbon source Phenylacetic (C) -0.9 -2.1 -1.0 N.D. N.D.
carbon source Phenylacetic (C) -0.9 -1.8 -1.3 N.D. N.D.
phage Bu1_10 +0.4 -2.0 -0.1 N.D. N.D.
phage Bu1_100 -0.9 -0.5 +0.1 N.D. N.D.
carbon source Valeric (C) +0.1 -0.9 -0.0 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.6 +0.1 N.D. N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.5 -0.4 +0.3 N.D. N.D.
carbon source D-Glucose 20 mM (C) -0.3 -0.6 +0.3 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.6 +0.2 -0.2 N.D. N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.4 -0.5 +0.3 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.4 -0.4 +0.3 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.2 -0.5 +0.2 N.D. N.D.
carbon source D-Glucose 20 mM (C) -0.3 -0.4 +0.2 N.D. N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.1 -0.7 +0.3 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -0.0 +0.3 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -0.3 +0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.5 -0.4 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 -0.6 +0.6 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 +0.1 +0.4 N.D. N.D.
carbon source Hexanoic (C) -0.4 -0.1 +0.6 N.D. N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.3 +0.5 -0.0 N.D. N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.3 +0.6 -0.1 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 +0.6 -0.0 N.D. N.D.
carbon source Azelaic (C) +0.4 -0.2 +0.7 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.3 +0.5 +0.1 N.D. N.D.
carbon source acetate (C) +0.3 +0.2 +0.5 N.D. N.D.
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