Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00283 and H281DRAFT_00284 are separated by 160 nucleotidesH281DRAFT_00284 and H281DRAFT_00285 are separated by 55 nucleotidesH281DRAFT_00285 and H281DRAFT_00286 are separated by 293 nucleotidesH281DRAFT_00286 and H281DRAFT_00287 are separated by 293 nucleotides H281DRAFT_00283: H281DRAFT_00283 - solute:Na+ symporter, SSS family, at 302,959 to 304,509 _00283 H281DRAFT_00284: H281DRAFT_00284 - Predicted membrane protein, at 304,670 to 305,884 _00284 H281DRAFT_00285: H281DRAFT_00285 - PhnB protein, at 305,940 to 306,356 _00285 H281DRAFT_00286: H281DRAFT_00286 - transaldolase, at 306,650 to 307,603 _00286 H281DRAFT_00287: H281DRAFT_00287 - benzoate membrane transport protein, at 307,897 to 309,117 _00287
Group Condition H281DRAFT_00283 H281DRAFT_00284 H281DRAFT_00285 H281DRAFT_00286 H281DRAFT_00287
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.1 -0.4 +0.2 -6.1 +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.1 -0.4 +0.4 -5.9 +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.1 -0.3 -4.4 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.3 +0.0 +0.1 -4.8 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.2 -0.2 -4.1 -0.2
carbon source D-Glucose (C) +0.2 +0.1 -0.2 -5.0 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.2 -0.2 +0.2 -4.2 -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.1 +0.1 -0.0 -4.9 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 -0.3 -0.4 -4.2 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.0 +0.1 -4.3 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.1 +0.2 -0.2 -4.2 +0.0
carbon source D-Glucose 20 mM (C) -0.0 -0.0 +1.0 -5.6 +0.3
carbon source D-Glucose (C) -0.0 +0.0 +0.1 -4.2 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.3 -0.4 -3.7 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.5 +0.2 -3.8 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.6 +0.2 -4.1 +0.6
carbon source D-Glucose (C) +0.0 -0.1 +0.1 -4.2 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.3 -0.1 -3.4 -0.1
carbon source D-Glucose (C) +0.1 -0.0 +0.2 -4.1 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 +0.1 -0.1 -3.8 +0.5
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.1 +0.7 -4.9 +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.4 +0.1 -3.1 +0.3
carbon source D-Glucose 20 mM (C) +0.1 -0.0 +0.7 -4.1 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.0 -0.7 +0.2 -2.8 +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 -0.0 +0.6 -2.7 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.4 +0.0 -2.8 +0.5
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.2 -0.1 -0.3 -2.6 +0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 -0.4 -0.1 -2.8 +0.6
carbon source D-Glucose (C) -0.0 +0.1 -0.3 -2.9 +0.6
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 -0.0 +0.5 -2.7 +0.4
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H281DRAFT_00284
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H281DRAFT_00287
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