Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00282 and H281DRAFT_00283 overlap by 1 nucleotidesH281DRAFT_00283 and H281DRAFT_00284 are separated by 160 nucleotidesH281DRAFT_00284 and H281DRAFT_00285 are separated by 55 nucleotidesH281DRAFT_00285 and H281DRAFT_00286 are separated by 293 nucleotides H281DRAFT_00282: H281DRAFT_00282 - Protein of unknown function (DUF3311), at 302,720 to 302,959 _00282 H281DRAFT_00283: H281DRAFT_00283 - solute:Na+ symporter, SSS family, at 302,959 to 304,509 _00283 H281DRAFT_00284: H281DRAFT_00284 - Predicted membrane protein, at 304,670 to 305,884 _00284 H281DRAFT_00285: H281DRAFT_00285 - PhnB protein, at 305,940 to 306,356 _00285 H281DRAFT_00286: H281DRAFT_00286 - transaldolase, at 306,650 to 307,603 _00286
Group Condition H281DRAFT_00282 H281DRAFT_00283 H281DRAFT_00284 H281DRAFT_00285 H281DRAFT_00286
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.2 +0.1 -0.4 +0.2 -6.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.6 -0.1 -0.4 +0.4 -5.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 +0.1 -0.3 -0.4 -3.7
carbon source D-Glucose (C) -0.4 +0.2 +0.1 -0.2 -5.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 -0.3 +0.0 +0.1 -4.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -0.2 -0.2 -0.2 -4.1
carbon source D-Glucose 20 mM (C) -0.2 -0.0 -0.0 +1.0 -5.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 +0.0 -0.5 +0.2 -3.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.1 -0.6 +0.2 -4.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.3 -0.0 +0.1 -4.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.5 +0.1 -0.3 -0.4 -4.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.6 -0.1 +0.1 -0.0 -4.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 -0.1 -0.1 -0.3 -4.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.2 -0.2 -0.2 +0.2 -4.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 +0.1 -0.4 +0.1 -3.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -0.0 +0.1 -0.1 -3.8
carbon source D-Glucose (C) -0.4 +0.1 -0.0 +0.2 -4.1
carbon source D-Glucose (C) -0.1 +0.0 -0.1 +0.1 -4.2
carbon source D-Glucose (C) -0.1 -0.0 +0.0 +0.1 -4.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.0 -0.4 +0.0 -2.8
carbon source D-Glucose 20 mM (C) -0.4 +0.1 -0.0 +0.7 -4.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 +0.0 -0.3 -0.1 -3.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.9 -0.1 +0.2 -0.2 -4.2
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.3 +0.1 +0.7 -4.9
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.9 -0.4 -0.0 +0.5 -2.7
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.8 -0.5 -0.0 +0.6 -2.7
carbon source Glycerol (C) +0.2 -0.2 +0.1 -0.2 -3.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.2 +0.1 -0.4 -0.1 -2.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.5 -0.0 -0.7 +0.2 -2.8
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.6 +0.2 -0.1 +0.6 -2.2
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H281DRAFT_00282
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H281DRAFT_00283
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H281DRAFT_00285
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H281DRAFT_00286
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