Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00124 and H281DRAFT_00125 are separated by 90 nucleotidesH281DRAFT_00125 and H281DRAFT_00126 are separated by 78 nucleotidesH281DRAFT_00126 and H281DRAFT_00127 are separated by 155 nucleotidesH281DRAFT_00127 and H281DRAFT_00128 are separated by 131 nucleotides H281DRAFT_00124: H281DRAFT_00124 - DNA polymerase III, chi subunit, at 132,240 to 132,656 _00124 H281DRAFT_00125: H281DRAFT_00125 - Protein of unknown function (DUF2486), at 132,747 to 133,460 _00125 H281DRAFT_00126: H281DRAFT_00126 - cytochrome c, at 133,539 to 133,880 _00126 H281DRAFT_00127: H281DRAFT_00127 - dihydroxyacid dehydratase, at 134,036 to 135,709 _00127 H281DRAFT_00128: H281DRAFT_00128 - transcriptional regulator, LysR family, at 135,841 to 136,830 _00128
Group Condition H281DRAFT_00124 H281DRAFT_00125 H281DRAFT_00126 H281DRAFT_00127 H281DRAFT_00128
phage Bu1_100 N.D. -0.5 -0.2 -0.0 -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.5 -0.3 -0.2 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 -0.3 +0.0 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.2 -0.1 +0.0 -0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.3 -0.1 +0.1 -0.5
carbon source Protocatechuic Acid (C) N.D. +0.1 -0.5 -0.1 -0.3
carbon source L-Glutamic (C) N.D. -0.5 +0.3 -0.1 -0.4
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. +0.4 -0.3 -0.2 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.6 +0.4 +0.0 +0.0
carbon source Malonic (C) N.D. -0.1 -0.4 +0.2 +0.3
carbon source Sebacic (C) N.D. +0.5 -0.5 -0.1 +0.1
phage Bu1_10 N.D. +0.6 -0.6 +0.1 -0.0
carbon source Suberic (C) N.D. +0.3 -0.4 -0.0 +0.2
carbon source D-Glucose (C) N.D. +0.2 -0.2 -0.1 +0.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.3 -0.4 +0.2 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. +0.3 +0.2 +0.3 -0.3
carbon source adipate (C) N.D. +0.2 -0.3 +0.3 +0.2
carbon source butyrate (C) N.D. +0.3 -0.3 +0.1 +0.3
carbon source Hexanoic (C) N.D. +0.2 -0.2 +0.3 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +0.4 -0.2 +0.1 +0.3
ecofab LB in EcoFAB_3.5mL N.D. +0.1 -0.2 +0.2 +0.5
carbon source Malonic (C) N.D. +0.1 -0.2 +0.3 +0.4
carbon source Glycerol (C) N.D. +0.4 -0.1 -0.0 +0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.6 +0.2 +0.2 -0.2
carbon source acetate (C) N.D. +0.5 +0.2 +0.0 +0.2
carbon source D-Glucose (C) N.D. +0.6 +0.2 -0.0 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.8 -0.1 +0.1 +0.1
carbon source Protocatechuic Acid (C) N.D. +0.4 -0.1 +0.4 +0.2
carbon source butyrate (C) N.D. +0.3 +0.2 +0.1 +0.8
carbon source Hexanoic (C) N.D. +0.8 +0.4 +0.3 +0.0
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