Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00071 and H281DRAFT_00072 are separated by 861 nucleotidesH281DRAFT_00072 and H281DRAFT_00073 overlap by 50 nucleotidesH281DRAFT_00073 and H281DRAFT_00074 are separated by 292 nucleotidesH281DRAFT_00074 and H281DRAFT_00075 are separated by 12 nucleotides H281DRAFT_00071: H281DRAFT_00071 - Integrase, at 71,866 to 72,945 _00071 H281DRAFT_00072: H281DRAFT_00072 - hypothetical protein, at 73,807 to 74,418 _00072 H281DRAFT_00073: H281DRAFT_00073 - hypothetical protein, at 74,369 to 74,494 _00073 H281DRAFT_00074: H281DRAFT_00074 - UDP-galactose 4-epimerase, at 74,787 to 75,809 _00074 H281DRAFT_00075: H281DRAFT_00075 - Glycosyltransferase involved in cell wall bisynthesis, at 75,822 to 76,970 _00075
Group Condition H281DRAFT_00071 H281DRAFT_00072 H281DRAFT_00073 H281DRAFT_00074 H281DRAFT_00075
phage Bu1_100 -0.4 +0.2 +0.0 -3.6 -2.1
phage Bu1_10 -0.6 -0.6 +0.4 -1.7 -3.2
control NoPhageControl -0.2 +0.2 +0.1 -3.0 -2.7
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -0.3 -1.4 -1.3 -1.7
carbon source succinate (C) +0.1 +0.1 +0.4 -1.4 -4.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 -0.0 -0.7 -1.5 -2.0
carbon source Protocatechuic Acid (C) -0.4 +0.1 -0.1 +0.6 -4.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.2 -0.5 -0.0 -3.0 -0.5
ecofab LB in EcoFAB_3.5mL -0.2 +0.0 -0.3 -1.1 -2.1
carbon source succinate (C) -0.2 -0.2 -0.3 -0.6 -2.2
carbon source Hexanoic (C) -0.3 -0.0 -1.7 -0.0 -1.1
carbon source Protocatechuic Acid (C) -0.4 -0.7 -0.2 +0.1 -1.3
carbon source Pimelic (C) -0.3 +0.3 -0.2 -2.6 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.6 -0.3 +0.5 -1.0 -1.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.6 +0.7 -0.8 -1.5
carbon source propionate (C) -0.2 +0.1 +0.4 -0.8 -1.4
carbon source Hexanoic (C) +0.1 +0.2 -0.6 -3.4 +1.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.9 -0.1 -1.1 -1.6
phage Bu1_100 -0.3 -0.1 +0.6 -1.9 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.6 -0.1 -0.6 -1.6
carbon source butyrate (C) +0.2 +0.7 -0.9 -0.1 -1.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.4 +0.2 -1.2 -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +1.2 +0.3 -1.5 -1.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 +0.5 +0.7 -0.5 -0.8
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.3 +0.4 +1.0 -1.1 -0.0
carbon source Valeric (C) -0.2 +0.4 +0.4 -1.0 +1.2
carbon source Phenylacetic (C) -0.6 -0.4 -0.3 +1.1 +1.0
carbon source Phenylacetic (C) -0.6 -0.5 +0.1 +1.3 +1.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.3 +0.5 +1.5 +0.4 +0.6
carbon source 4-Hydroxybenzoic Acid (C) -1.2 +0.8 -0.5 +2.1 +2.1
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