Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_4210 and Ga0059261_4211 are separated by 117 nucleotidesGa0059261_4211 and Ga0059261_4212 are separated by 34 nucleotidesGa0059261_4212 and Ga0059261_4213 overlap by 28 nucleotidesGa0059261_4213 and Ga0059261_4214 are separated by 184 nucleotides Ga0059261_4210: Ga0059261_4210 - Uracil-DNA glycosylase, at 4,363,842 to 4,364,579 _4210 Ga0059261_4211: Ga0059261_4211 - Dehydrogenases (flavoproteins), at 4,364,697 to 4,366,358 _4211 Ga0059261_4212: Ga0059261_4212 - TPR repeat, at 4,366,393 to 4,367,955 _4212 Ga0059261_4213: Ga0059261_4213 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148), at 4,367,928 to 4,368,779 _4213 Ga0059261_4214: Ga0059261_4214 - Enoyl-CoA hydratase/carnithine racemase, at 4,368,964 to 4,369,692 _4214
Group Condition Ga0059261_4210 Ga0059261_4211 Ga0059261_4212 Ga0059261_4213 Ga0059261_4214
motility outer cut, LB soft agar motility assay N.D. N.D. -0.2 N.D. -1.2
motility inner cut, LB soft agar motility assay N.D. N.D. -0.3 N.D. -1.1
stress methylglyoxal 0.005 vol% N.D. N.D. -0.5 N.D. -0.8
motility inner cut, LB soft agar motility assay N.D. N.D. -1.4 N.D. +0.2
stress Chloramphenicol 0.0005 mg/ml N.D. N.D. -0.8 N.D. -0.3
motility inner cut, LB soft agar motility assay N.D. N.D. -0.8 N.D. -0.2
stress Cephalothin 0.3 mg/ml N.D. N.D. -0.8 N.D. -0.2
stress Vanillin 0.25 mM N.D. N.D. -0.1 N.D. -0.8
stress Benzalkonium Chloride 0.0005 mg/ml N.D. N.D. -0.7 N.D. -0.2
stress 1-ethyl-3-methylimidazolium lysine 5 mM N.D. N.D. -0.4 N.D. -0.4
stress Choline chloride 10 mM N.D. N.D. -0.4 N.D. -0.4
temperature LB 20C N.D. N.D. -0.8 N.D. +0.1
carbon source a-Cyclodextrin (C) N.D. N.D. -0.5 N.D. +0.3
temperature LB 20C N.D. N.D. -0.7 N.D. +0.6
lb LB N.D. N.D. -0.5 N.D. +0.5
temperature LB 30C N.D. N.D. -0.4 N.D. +0.5
carbon source D-Glucose (C) N.D. N.D. -0.3 N.D. +0.5
nitrogen source L-Glutamine (N) N.D. N.D. +0.6 N.D. -0.1
motility outer cut, LB soft agar motility assay N.D. N.D. -0.4 N.D. +1.1
nitrogen source L-Proline (N) N.D. N.D. +0.3 N.D. +0.5
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. N.D. +0.7 N.D. +0.1
carbon source NAG (C) N.D. N.D. +0.6 N.D. +0.2
carbon source D-Cellobiose (C) N.D. N.D. +0.5 N.D. +0.3
nutrient L-Glutamic (C); no added vitamins N.D. N.D. +0.5 N.D. +0.4
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins N.D. N.D. +0.5 N.D. +0.5
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. N.D. +0.4 N.D. +0.7
nutrient D-Cellobiose (C); no added vitamins N.D. N.D. +0.9 N.D. +0.2
nutrient D-Cellobiose (C); no added vitamins N.D. N.D. +0.8 N.D. +0.5
nutrient D-Glucose (C); no added vitamins N.D. N.D. +1.3 N.D. +0.2
nutrient D-Glucose (C); no added vitamins N.D. N.D. +1.3 N.D. +0.6
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