Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_4193 and Ga0059261_4194 are separated by 11 nucleotidesGa0059261_4194 and Ga0059261_4195 overlap by 4 nucleotidesGa0059261_4195 and Ga0059261_4196 overlap by 4 nucleotidesGa0059261_4196 and Ga0059261_4197 overlap by 1 nucleotides Ga0059261_4193: Ga0059261_4193 - hypothetical protein, at 4,343,841 to 4,345,427 _4193 Ga0059261_4194: Ga0059261_4194 - Type II secretory pathway, component ExeA (predicted ATPase), at 4,345,439 to 4,346,545 _4194 Ga0059261_4195: Ga0059261_4195 - polysaccharide deacetylase family protein, PEP-CTERM locus subfamily, at 4,346,542 to 4,347,384 _4195 Ga0059261_4196: Ga0059261_4196 - FemAB-related protein, PEP-CTERM system-associated, at 4,347,381 to 4,348,454 _4196 Ga0059261_4197: Ga0059261_4197 - sugar transferase, PEP-CTERM/EpsH1 system associated, at 4,348,454 to 4,349,677 _4197
Group Condition Ga0059261_4193 Ga0059261_4194 Ga0059261_4195 Ga0059261_4196 Ga0059261_4197
temperature LB 20C -0.7 -1.0 -0.6 -0.8 -1.4
nitrogen source L-Proline (N) -0.6 -0.5 -0.9 -0.3 -0.7
motility outer cut, LB soft agar motility assay -0.6 -1.0 -0.3 -0.0 -1.0
motility outer cut, LB soft agar motility assay -0.4 -0.7 -0.6 -0.5 -0.6
nutrient D-Glucose (C); no added vitamins +0.3 -0.1 -0.9 -0.3 +0.6
motility inner cut, LB soft agar motility assay +0.4 -2.1 +0.8 +0.8 +0.6
nitrogen source L-Histidine (N) +0.5 +0.3 +0.3 +0.5 +0.4
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.4 +0.4 +0.2 +0.5 +0.6
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.4 +0.1 +0.3 +0.7 +0.6
carbon source L-Glutamic (C) +0.3 +0.5 +0.4 +0.5 +0.3
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.4 +0.4 +0.2 +0.6 +0.5
nitrogen source L-Glutamic (N) +0.5 +0.3 +0.4 +0.5 +0.4
carbon source D-Cellobiose (C) +0.4 +0.3 +0.4 +0.6 +0.6
nitrogen source L-Glutamic (N) +0.5 +0.5 +0.4 +0.6 +0.4
motility inner cut, LB soft agar motility assay +0.4 +0.6 +0.7 +0.7 -0.1
carbon source D-Cellobiose (C) +0.5 +0.4 +0.4 +0.5 +0.5
carbon source NAG (C) +0.3 +0.3 +0.2 +0.7 +0.7
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.5 +0.3 +0.4 +0.5 +0.7
stress Spectinomycin 2 mg/ml +0.5 +0.6 +0.5 +0.5 +0.4
carbon source L-Glutamic (C) +0.5 +0.5 +0.3 +0.6 +0.6
carbon source D-Glucose (C) +0.4 +0.4 +0.5 +0.5 +0.7
carbon source D-Glucose (C) +0.6 +0.5 +0.5 +0.7 +0.4
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.6 +0.4 +0.5 +0.6 +0.7
carbon source L-Glutamine (C) +0.5 +0.6 +0.4 +0.4 +0.7
carbon source D-Xylose (C) +0.5 +0.5 +0.5 +0.6 +0.6
stress Phosphomycin 0.005 mg/ml +0.6 +0.4 +0.8 +0.5 +0.6
carbon source L-Glutamic (C) +0.5 +0.6 +0.5 +0.6 +0.6
motility inner cut, LB soft agar motility assay +1.0 -0.2 +0.5 +1.0 +1.1
stress Nickel (II) chloride 1.5 mM +0.9 +0.6 +0.9 +0.7 +0.8
motility inner cut, LB soft agar motility assay +0.5 +0.4 +1.6 +1.4 +1.1
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