Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_4169 and Ga0059261_4170 overlap by 10 nucleotidesGa0059261_4170 and Ga0059261_4171 are separated by 90 nucleotidesGa0059261_4171 and Ga0059261_4172 overlap by 7 nucleotidesGa0059261_4172 and Ga0059261_4173 are separated by 158 nucleotides Ga0059261_4169: Ga0059261_4169 - Kef-type K+ transport system, predicted NAD-binding component, at 4,319,240 to 4,320,880 _4169 Ga0059261_4170: Ga0059261_4170 - Predicted enzyme related to lactoylglutathione lyase, at 4,320,871 to 4,321,245 _4170 Ga0059261_4171: Ga0059261_4171 - redox-sensitive transcriptional activator SoxR, at 4,321,336 to 4,321,800 _4171 Ga0059261_4172: Ga0059261_4172 - hypothetical protein, at 4,321,794 to 4,322,744 _4172 Ga0059261_4173: Ga0059261_4173 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 4,322,903 to 4,325,140 _4173
Group Condition Ga0059261_4169 Ga0059261_4170 Ga0059261_4171 Ga0059261_4172 Ga0059261_4173
motility outer cut, LB soft agar motility assay -1.3 +0.0 -0.1 +0.1 +0.0
carbon source L-Glutamine (C) -0.3 +0.0 -0.6 +0.1 -0.0
motility inner cut, LB soft agar motility assay +0.3 +0.2 -0.7 -0.5 +0.1
carbon source D-Glucose (C) -0.4 +0.1 -0.3 +0.1 +0.1
carbon source a-Cyclodextrin (C) -0.3 +0.1 -0.3 +0.1 +0.1
pH LB, pH7 -0.4 -0.2 +0.3 +0.0 -0.0
temperature LB 20C +0.4 -0.2 -0.4 +0.0 +0.0
stress methylglyoxal 0.005 vol% -0.6 +0.2 +0.2 +0.0 -0.0
nutrient D-Cellobiose (C); no added vitamins -0.5 +0.3 -0.3 +0.5 -0.1
carbon source D-Maltose (C) -0.2 +0.2 -0.4 +0.2 +0.1
nitrogen source L-Glutamic (N) +0.0 -0.2 -0.4 +0.4 +0.0
carbon source NAG (C) +0.0 -0.1 -0.3 +0.3 +0.1
carbon source D-Glucose (C) -0.4 +0.1 +0.3 +0.1 +0.0
carbon source D-Glucose (C) -0.5 +0.2 +0.3 +0.2 +0.1
pH LB, pH6 +0.3 -0.1 +0.3 -0.1 +0.0
nitrogen source L-Histidine (N) +0.4 -0.2 -0.3 +0.6 +0.1
nutrient D-Cellobiose (C); no added vitamins -0.2 +0.3 -0.0 +0.5 +0.0
nitrogen source L-Proline (N) +0.6 -0.1 -0.7 +1.0 -0.1
nitrogen source L-Glutamine (N) +0.5 +0.1 -0.1 +0.4 -0.0
stress 1-ethyl-3-methylimidazolium acetate 5 mM +0.4 +0.2 +0.3 +0.1 -0.0
carbon source D-Cellobiose (C) +0.3 +0.2 +0.0 +0.2 +0.1
nitrogen source L-Proline (N) +0.6 +0.0 -0.3 +0.7 -0.1
motility outer cut, LB soft agar motility assay +1.1 -0.3 -0.3 +0.4 -0.0
motility inner cut, LB soft agar motility assay +0.2 -0.1 +0.4 +0.6 +0.0
motility inner cut, LB soft agar motility assay +0.6 -0.5 +1.1 -0.1 +0.0
nutrient L-Glutamic (C); no added vitamins +0.5 +0.2 +0.2 +0.3 -0.0
nutrient D-Glucose (C); no added vitamins +0.3 +0.2 +0.1 +0.5 +0.1
nitrogen source L-Glutamine (N) +0.1 -0.1 +0.1 +1.1 -0.0
motility inner cut, LB soft agar motility assay +0.9 -0.0 +0.2 +0.1 +0.2
nutrient D-Glucose (C); no added vitamins +0.7 +0.2 +0.3 +0.8 +0.1
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