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Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_4075 and Ga0059261_4076 overlap by 1 nucleotides
Ga0059261_4076 and Ga0059261_4077 are separated by 307 nucleotides
Ga0059261_4077 and Ga0059261_4078 overlap by 8 nucleotides
Ga0059261_4078 and Ga0059261_4079 are separated by 244 nucleotides
Ga0059261_4075: Ga0059261_4075 - sulfate adenylyltransferase, large subunit, at 4,206,116 to 4,208,023
_4075
Ga0059261_4076: Ga0059261_4076 - sulfate adenylyltransferase, small subunit, at 4,208,023 to 4,208,943
_4076
Ga0059261_4077: Ga0059261_4077 - Nucleoside-diphosphate-sugar epimerases, at 4,209,251 to 4,210,312
_4077
Ga0059261_4078: Ga0059261_4078 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 4,210,305 to 4,211,108
_4078
Ga0059261_4079: Ga0059261_4079 - hypothetical protein, at 4,211,353 to 4,213,377
_4079
Group
Condition
Ga0059261
_4075
Ga0059261
_4076
Ga0059261
_4077
Ga0059261
_4078
Ga0059261
_4079
carbon source
L-Glutamic (C)
-0.2
-0.1
-0.1
-0.2
-0.1
carbon source
D-Glucose (C)
-0.1
-0.1
-0.2
-0.2
-0.1
nitrogen source
L-Glutamine (N)
-0.1
-0.1
-0.1
-0.1
-0.1
motility
inner cut, LB soft agar motility assay
-0.4
+0.1
+0.1
-0.2
-0.1
motility
inner cut, LB soft agar motility assay
-0.1
-0.0
+0.1
-0.5
-0.1
stress
Cobalt chloride 0.08 mM
-0.1
+0.0
-0.1
-0.2
-0.1
temperature
LB 37C
-0.1
-0.1
+0.0
-0.3
-0.2
temperature
LB 37C
-0.2
-0.0
+0.0
-0.3
-0.0
stress
1-ethyl-3-methylimidazolium lysine 2.5 mM
-0.0
-0.1
-0.0
-0.3
-0.1
motility
outer cut, LB soft agar motility assay
+0.0
-0.1
-0.1
-0.7
+0.4
stress
1-ethyl-3-methylimidazolium chloride 20 mM
-0.1
-0.1
-0.1
-0.1
-0.1
stress
1-ethyl-3-methylimidazolium lysine 5 mM
-0.1
-0.0
-0.1
-0.1
-0.1
stress
Cephalothin 0.3 mg/ml
-0.1
+0.0
-0.1
-0.2
-0.1
nitrogen source
L-Glutamic (N)
-0.1
-0.1
-0.0
-0.1
-0.0
stress
Nalidixic 0.025 mg/ml
-0.1
-0.1
-0.0
-0.2
-0.1
carbon source
D-Cellobiose (C)
-0.0
-0.1
-0.2
-0.1
-0.1
stress
acetate 40 mM
-0.1
+0.0
-0.1
-0.2
-0.0
stress
acetate 20 mM
+0.0
+0.0
-0.1
-0.2
-0.1
pH
LB, pH7
-0.0
+0.1
-0.1
-0.2
+0.1
pH
LB, pH6
-0.2
+0.0
+0.1
+0.0
+0.0
motility
outer cut, LB soft agar motility assay
-0.2
+0.2
+0.1
-0.0
+0.0
motility
inner cut, LB soft agar motility assay
-0.2
-0.1
+0.2
+0.2
-0.0
nutrient
D-Glucose (C); no added vitamins
+0.1
-0.0
-0.0
+0.3
-0.2
stress
Chlorite 1.25 mM
+0.1
+0.0
+0.1
-0.2
+0.0
stress
nitrite 2.5 mM
+0.1
+0.1
+0.0
-0.1
+0.1
stress
benzoic 0.29 mg/ml
-0.0
+0.1
-0.1
+0.1
+0.2
stress
Paraquat dichloride 0.045 mg/ml
-0.0
+0.0
-0.1
+0.3
+0.1
stress
Cisplatin 0.01 mg/ml
-0.1
+0.1
+0.1
+0.2
+0.0
stress
Paraquat dichloride 0.035 mg/ml
+0.0
+0.1
-0.0
+0.3
+0.1
stress
nitrate 100 mM
+0.1
-0.0
+0.2
+0.2
+0.1
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