Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_4074 and Ga0059261_4075 are separated by 7 nucleotidesGa0059261_4075 and Ga0059261_4076 overlap by 1 nucleotidesGa0059261_4076 and Ga0059261_4077 are separated by 307 nucleotidesGa0059261_4077 and Ga0059261_4078 overlap by 8 nucleotides Ga0059261_4074: Ga0059261_4074 - two component transcriptional regulator, LuxR family, at 4,205,485 to 4,206,108 _4074 Ga0059261_4075: Ga0059261_4075 - sulfate adenylyltransferase, large subunit, at 4,206,116 to 4,208,023 _4075 Ga0059261_4076: Ga0059261_4076 - sulfate adenylyltransferase, small subunit, at 4,208,023 to 4,208,943 _4076 Ga0059261_4077: Ga0059261_4077 - Nucleoside-diphosphate-sugar epimerases, at 4,209,251 to 4,210,312 _4077 Ga0059261_4078: Ga0059261_4078 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 4,210,305 to 4,211,108 _4078
Group Condition Ga0059261_4074 Ga0059261_4075 Ga0059261_4076 Ga0059261_4077 Ga0059261_4078
motility outer cut, LB soft agar motility assay -0.2 +0.0 -0.1 -0.1 -0.7
motility inner cut, LB soft agar motility assay -0.5 -0.1 -0.0 +0.1 -0.5
carbon source L-Glutamic (C) -0.1 -0.2 -0.1 -0.1 -0.2
nutrient D-Cellobiose (C); no added vitamins -0.4 -0.1 -0.0 -0.1 -0.1
carbon source D-Glucose (C) -0.1 -0.1 -0.1 -0.2 -0.2
carbon source D-Cellobiose (C) -0.2 -0.0 -0.1 -0.2 -0.1
stress 1-ethyl-3-methylimidazolium lysine 2.5 mM -0.1 -0.0 -0.1 -0.0 -0.3
motility inner cut, LB soft agar motility assay -0.1 -0.4 +0.1 +0.1 -0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.1 -0.1 +0.0 -0.1 -0.2
nitrogen source L-Glutamine (N) +0.1 -0.1 -0.1 -0.1 -0.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -0.3 -0.0 +0.0 -0.1 -0.1
temperature LB 37C +0.1 -0.2 -0.0 +0.0 -0.3
stress acetate 40 mM +0.0 -0.1 +0.0 -0.1 -0.2
motility outer cut, LB soft agar motility assay -0.4 -0.2 +0.2 +0.1 -0.0
stress Cobalt chloride 0.08 mM +0.1 -0.1 +0.0 -0.1 -0.2
nitrogen source L-Glutamic (N) +0.1 -0.1 -0.1 -0.0 -0.1
stress Thallium(I) acetate 0.01 mg/ml -0.2 -0.0 -0.0 -0.1 +0.1
stress Nalidixic 0.025 mg/ml +0.1 -0.1 -0.1 -0.0 -0.2
stress Cephalothin 0.3 mg/ml +0.2 -0.1 +0.0 -0.1 -0.2
stress copper (II) chloride 0.75 mM -0.1 +0.0 -0.1 -0.0 +0.2
stress Chlorite 1.25 mM +0.0 +0.1 +0.0 +0.1 -0.2
nutrient D-Glucose (C); no added vitamins -0.1 +0.1 -0.0 -0.0 +0.3
stress Cisplatin 0.01 mg/ml -0.0 -0.1 +0.1 +0.1 +0.2
stress Paraquat dichloride 0.045 mg/ml +0.0 -0.0 +0.0 -0.1 +0.3
stress sodium fluoride 10 mM +0.3 +0.0 -0.2 -0.0 +0.1
motility inner cut, LB soft agar motility assay +0.2 -0.2 -0.1 +0.2 +0.2
carbon source a-Cyclodextrin (C) +0.2 -0.0 +0.0 -0.1 +0.2
stress nitrite 10 mM +0.2 +0.1 +0.0 +0.1 -0.0
stress nitrate 100 mM +0.0 +0.1 -0.0 +0.2 +0.2
carbon source a-Cyclodextrin (C) +0.1 +0.1 -0.0 +0.0 +0.3
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