Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_4022 and Ga0059261_4023 overlap by 4 nucleotidesGa0059261_4023 and Ga0059261_4024 overlap by 28 nucleotidesGa0059261_4024 and Ga0059261_4025 overlap by 4 nucleotidesGa0059261_4025 and Ga0059261_4026 overlap by 8 nucleotides Ga0059261_4022: Ga0059261_4022 - Signal transduction histidine kinase, at 4,139,490 to 4,141,757 _4022 Ga0059261_4023: Ga0059261_4023 - tRNA threonylcarbamoyl adenosine modification protein YjeE, at 4,141,754 to 4,142,200 _4023 Ga0059261_4024: Ga0059261_4024 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 4,142,173 to 4,143,165 _4024 Ga0059261_4025: Ga0059261_4025 - Nucleotidyl transferase, at 4,143,162 to 4,143,923 _4025 Ga0059261_4026: Ga0059261_4026 - double-strand break repair protein AddB, alphaproteobacterial type, at 4,143,916 to 4,146,861 _4026
Group Condition Ga0059261_4022 Ga0059261_4023 Ga0059261_4024 Ga0059261_4025 Ga0059261_4026
stress Phosphomycin 0.005 mg/ml +0.0 N.D. -3.5 -4.7 N.D.
motility outer cut, LB soft agar motility assay -1.6 N.D. +0.0 -1.6 N.D.
motility outer cut, LB soft agar motility assay -1.5 N.D. -0.6 -0.8 N.D.
stress Thallium(I) acetate 0.01 mg/ml -0.4 N.D. -1.0 -1.1 N.D.
motility inner cut, LB soft agar motility assay -0.3 N.D. -0.4 -1.4 N.D.
stress Paraquat dichloride 0.035 mg/ml -0.1 N.D. -0.9 -1.0 N.D.
stress Paraquat dichloride 0.045 mg/ml +0.1 N.D. -0.8 -1.1 N.D.
motility inner cut, LB soft agar motility assay -0.1 N.D. -0.4 -1.3 N.D.
stress methylglyoxal 0.005 vol% +0.1 N.D. -0.4 -1.4 N.D.
temperature LB 20C -0.7 N.D. -0.1 -0.8 N.D.
stress Polymyxin B sulfate 0.1 mg/ml -0.5 N.D. -0.2 -0.9 N.D.
stress Polymyxin B sulfate 0.05 mg/ml -0.2 N.D. -0.2 -1.2 N.D.
nitrogen source L-Proline (N) +0.4 N.D. -0.8 -0.8 N.D.
carbon source NAG (C) +0.8 N.D. -0.4 -1.1 N.D.
nitrogen source L-Proline (N) +0.5 N.D. -0.8 -0.4 N.D.
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.7 N.D. +0.0 -0.9 N.D.
carbon source D-Glucose (C) +1.0 N.D. +0.1 -1.1 N.D.
nitrogen source L-Histidine (N) +0.9 N.D. -0.2 -0.6 N.D.
carbon source NAG (C) +0.6 N.D. +0.2 -0.7 N.D.
carbon source L-Glutamic (C) +0.9 N.D. -0.3 -0.3 N.D.
carbon source L-Glutamic (C) +1.0 N.D. -0.2 -0.6 N.D.
carbon source D-Cellobiose (C) +1.0 N.D. -0.1 -0.4 N.D.
carbon source L-Glutamic (C) +1.2 N.D. -0.4 -0.3 N.D.
carbon source D-Glucose (C) +0.9 N.D. -0.3 +0.4 N.D.
nitrogen source L-Glutamine (N) +1.3 N.D. -0.5 +0.4 N.D.
carbon source D-Glucose (C) +0.9 N.D. -0.3 +0.5 N.D.
carbon source D-Maltose (C) +1.2 N.D. -0.1 +0.3 N.D.
motility inner cut, LB soft agar motility assay +0.6 N.D. -0.9 +1.7 N.D.
nutrient D-Cellobiose (C); no added vitamins +0.9 N.D. +0.4 +0.3 N.D.
nutrient D-Cellobiose (C); no added vitamins +1.0 N.D. +0.3 +0.6 N.D.
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Ga0059261_4022
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