Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3962 and Ga0059261_3963 overlap by 4 nucleotidesGa0059261_3963 and Ga0059261_3964 overlap by 4 nucleotidesGa0059261_3964 and Ga0059261_3965 are separated by 47 nucleotidesGa0059261_3965 and Ga0059261_3966 overlap by 4 nucleotides Ga0059261_3962: Ga0059261_3962 - N-formylglutamate deformylase (EC 3.5.1.68) (from data), at 4,077,339 to 4,078,133 _3962 Ga0059261_3963: Ga0059261_3963 - Histidine ammonia-lyase (EC 4.3.1.3) (from data), at 4,078,130 to 4,079,623 _3963 Ga0059261_3964: Ga0059261_3964 - Imidazolonepropionase (EC 3.5.2.7) (from data), at 4,079,620 to 4,080,807 _3964 Ga0059261_3965: Ga0059261_3965 - formimidoylglutamate deiminase (EC 3.5.3.13), at 4,080,855 to 4,082,198 _3965 Ga0059261_3966: Ga0059261_3966 - Transcriptional regulators, at 4,082,195 to 4,082,887 _3966
Group Condition Ga0059261_3962 Ga0059261_3963 Ga0059261_3964 Ga0059261_3965 Ga0059261_3966
nitrogen source L-Histidine (N) -3.0 -3.3 -3.6 -4.8 +1.2
motility inner cut, LB soft agar motility assay -0.1 -0.0 -0.3 -0.5 -1.6
motility inner cut, LB soft agar motility assay -0.7 -0.3 +0.1 -0.9 -0.7
carbon source NAG (C) -0.1 -0.3 -0.3 -0.2 -1.4
motility outer cut, LB soft agar motility assay -0.6 +0.2 +0.3 -0.9 -0.9
carbon source casaminos (C) -0.2 -0.3 -0.3 -1.3 +0.3
motility inner cut, LB soft agar motility assay -0.2 +0.4 -0.1 -1.2 -0.8
motility inner cut, LB soft agar motility assay -0.4 +0.3 -0.1 -0.4 -1.0
stress Fusidic 0.0005 mg/ml +0.2 +0.1 +0.1 -2.0 +0.1
carbon source casaminos (C) -0.1 -0.0 -0.2 -1.5 +0.3
carbon source a-Cyclodextrin (C) +0.5 -0.4 -0.0 -0.3 -1.0
nutrient L-Glutamic (C); no added vitamins +0.2 -0.1 -0.0 +0.5 -1.1
stress Cobalt chloride 0.08 mM -0.2 +0.4 +0.4 -0.6 -0.5
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.2 -0.2 -0.1 +1.0 -1.0
carbon source D-Fructose (C) +0.3 +0.0 +0.0 +0.7 -1.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.2 -0.2 -0.0 +0.8 -0.8
carbon source D-Maltose (C) +0.5 +0.2 +0.3 +0.4 -1.3
nutrient L-Glutamic (C); no added vitamins +0.2 -0.0 -0.0 +0.9 -1.0
nitrogen source L-Glutamine (N) -0.7 +0.5 -0.2 +1.1 -0.5
carbon source D-Cellobiose (C) +0.4 +0.1 +0.2 +0.6 -0.9
carbon source NAG (C) +0.5 +0.0 +0.2 +0.9 -1.1
carbon source NAG (C) +0.3 +0.1 +0.2 +1.0 -0.9
nitrogen source L-Alanine (N) +0.4 +0.5 +0.3 +0.9 -1.4
nitrogen source L-Proline (N) -0.3 +0.3 -0.1 +1.1 -0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.6 +0.1 +0.3 +1.7 -1.6
nutrient D-Glucose (C); no added vitamins +0.4 +0.1 +0.2 +2.5 -2.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.9 +0.2 +0.2 +1.8 -1.0
nutrient D-Glucose (C); no added vitamins +0.3 +0.1 +0.1 +2.6 -1.0
nutrient D-Cellobiose (C); no added vitamins +0.6 +0.5 +0.3 +3.2 -2.2
nutrient D-Cellobiose (C); no added vitamins +0.6 +0.4 +0.3 +3.4 -1.2
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