Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3961 and Ga0059261_3962 overlap by 4 nucleotidesGa0059261_3962 and Ga0059261_3963 overlap by 4 nucleotidesGa0059261_3963 and Ga0059261_3964 overlap by 4 nucleotidesGa0059261_3964 and Ga0059261_3965 are separated by 47 nucleotides Ga0059261_3961: Ga0059261_3961 - Urocanate hydratase (EC 4.2.1.49) (from data), at 4,075,672 to 4,077,342 _3961 Ga0059261_3962: Ga0059261_3962 - N-formylglutamate deformylase (EC 3.5.1.68) (from data), at 4,077,339 to 4,078,133 _3962 Ga0059261_3963: Ga0059261_3963 - Histidine ammonia-lyase (EC 4.3.1.3) (from data), at 4,078,130 to 4,079,623 _3963 Ga0059261_3964: Ga0059261_3964 - Imidazolonepropionase (EC 3.5.2.7) (from data), at 4,079,620 to 4,080,807 _3964 Ga0059261_3965: Ga0059261_3965 - formimidoylglutamate deiminase (EC 3.5.3.13), at 4,080,855 to 4,082,198 _3965
Group Condition Ga0059261_3961 Ga0059261_3962 Ga0059261_3963 Ga0059261_3964 Ga0059261_3965
nitrogen source L-Histidine (N) -3.4 -3.0 -3.3 -3.6 -4.8
carbon source casaminos (C) -0.1 -0.2 -0.3 -0.3 -1.3
carbon source casaminos (C) -0.1 -0.1 -0.0 -0.2 -1.5
motility inner cut, LB soft agar motility assay -0.2 -0.7 -0.3 +0.1 -0.9
stress Fusidic 0.0005 mg/ml +0.2 +0.2 +0.1 +0.1 -2.0
stress nitrite 2.5 mM -0.3 -0.4 -0.1 -0.2 -0.5
motility outer cut, LB soft agar motility assay -0.2 -0.6 +0.2 +0.3 -0.9
motility inner cut, LB soft agar motility assay -0.1 -0.2 +0.4 -0.1 -1.2
motility inner cut, LB soft agar motility assay -0.3 -0.4 +0.3 -0.1 -0.4
stress Sisomicin 0.12 mg/ml +0.1 -0.2 +0.1 +0.2 -0.9
stress Phosphomycin 0.005 mg/ml +0.3 +0.3 +0.1 +0.0 -1.2
carbon source L-Glutamine (C) -0.2 -0.4 +0.0 -0.3 +0.6
stress Cobalt chloride 0.08 mM -0.2 -0.2 +0.4 +0.4 -0.6
nitrogen source L-Glutamine (N) -0.5 -0.7 +0.5 -0.2 +1.1
nitrogen source L-Glutamine (N) -0.3 -0.1 +0.1 -0.1 +0.8
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -0.3 +0.2 -0.2 -0.1 +1.0
nitrogen source L-Proline (N) -0.5 -0.3 +0.3 -0.1 +1.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -0.2 +0.2 -0.2 -0.0 +0.8
carbon source D-Maltose (C) -0.5 +0.5 +0.2 +0.3 +0.4
nitrogen source L-Proline (N) -0.5 -0.1 +0.3 +0.1 +1.3
stress A22 0.02 mg/ml -0.2 +0.3 +0.5 +0.3 +0.3
carbon source NAG (C) -0.3 +0.5 +0.0 +0.2 +0.9
carbon source NAG (C) -0.1 +0.3 +0.1 +0.2 +1.0
nitrogen source L-Alanine (N) -0.1 +0.4 +0.5 +0.3 +0.9
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.3 +0.6 +0.1 +0.3 +1.7
nutrient D-Glucose (C); no added vitamins -0.6 +0.3 +0.1 +0.1 +2.6
nutrient D-Glucose (C); no added vitamins -0.5 +0.4 +0.1 +0.2 +2.5
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.3 +0.9 +0.2 +0.2 +1.8
nutrient D-Cellobiose (C); no added vitamins -0.9 +0.6 +0.4 +0.3 +3.4
nutrient D-Cellobiose (C); no added vitamins -0.8 +0.6 +0.5 +0.3 +3.2
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