Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 166 experiments or choose conditions or try the comparative fitness browser

500 ntGa0059261_3960 and Ga0059261_3961 are separated by 86 nucleotidesGa0059261_3961 and Ga0059261_3962 overlap by 4 nucleotidesGa0059261_3962 and Ga0059261_3963 overlap by 4 nucleotidesGa0059261_3963 and Ga0059261_3964 overlap by 4 nucleotides Ga0059261_3960: Ga0059261_3960 - hypothetical protein, at 4,074,845 to 4,075,585 _3960 Ga0059261_3961: Ga0059261_3961 - Urocanate hydratase (EC 4.2.1.49) (from data), at 4,075,672 to 4,077,342 _3961 Ga0059261_3962: Ga0059261_3962 - N-formylglutamate deformylase (EC 3.5.1.68) (from data), at 4,077,339 to 4,078,133 _3962 Ga0059261_3963: Ga0059261_3963 - Histidine ammonia-lyase (EC 4.3.1.3) (from data), at 4,078,130 to 4,079,623 _3963 Ga0059261_3964: Ga0059261_3964 - Imidazolonepropionase (EC 3.5.2.7) (from data), at 4,079,620 to 4,080,807 _3964
Group Condition Ga0059261_3960 Ga0059261_3961 Ga0059261_3962 Ga0059261_3963 Ga0059261_3964
nitrogen source L-Histidine (N) +0.0 -3.4 -3.0 -3.3 -3.6
stress nitrite 2.5 mM -0.2 -0.3 -0.4 -0.1 -0.2
carbon source casaminos (C) -0.0 -0.1 -0.2 -0.3 -0.3
stress Paraquat dichloride 0.035 mg/ml -0.2 -0.1 -0.2 -0.2 -0.3
motility inner cut, LB soft agar motility assay +0.2 -0.2 -0.7 -0.3 +0.1
nitrogen source L-Glutamine (N) +0.1 -0.5 -0.7 +0.5 -0.2
nitrogen source L-Proline (N) +0.1 -0.5 -0.3 +0.3 -0.1
motility inner cut, LB soft agar motility assay +0.3 -0.3 -0.4 +0.3 -0.1
carbon source a-Cyclodextrin (C) -0.0 -0.2 +0.5 -0.4 -0.0
nitrogen source L-Proline (N) +0.1 -0.5 -0.1 +0.3 +0.1
motility outer cut, LB soft agar motility assay +0.2 -0.2 -0.6 +0.2 +0.3
nutrient D-Glucose (C); no added vitamins +0.0 -0.6 +0.3 +0.1 +0.1
nutrient D-Glucose (C); no added vitamins -0.1 -0.5 +0.4 +0.1 +0.2
carbon source D-Raffinose (C) +0.0 -0.4 +0.3 +0.1 +0.2
motility inner cut, LB soft agar motility assay +0.2 -0.1 -0.2 +0.4 -0.1
carbon source a-Cyclodextrin (C) +0.0 -0.2 +0.6 -0.2 +0.0
motility outer cut, LB soft agar motility assay +0.4 -0.2 -0.1 +0.3 -0.1
nutrient D-Cellobiose (C); no added vitamins -0.0 -0.9 +0.6 +0.4 +0.3
carbon source D-Maltose (C) +0.0 -0.3 +0.5 +0.1 +0.1
carbon source NAG (C) -0.0 -0.3 +0.5 +0.0 +0.2
stress Cobalt chloride 0.08 mM -0.0 -0.2 -0.2 +0.4 +0.4
carbon source D-Glucose (C) +0.1 -0.2 +0.5 +0.1 +0.1
carbon source D-Maltose (C) +0.0 -0.5 +0.5 +0.2 +0.3
nutrient D-Cellobiose (C); no added vitamins -0.1 -0.8 +0.6 +0.5 +0.3
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.0 -0.3 +0.6 +0.1 +0.3
stress Lomefloxacin 0.01 mM +0.2 +0.2 -0.0 +0.4 +0.2
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.0 -0.3 +0.9 +0.2 +0.2
stress A22 0.02 mg/ml +0.2 -0.2 +0.3 +0.5 +0.3
nitrogen source L-Glutamic (N) +0.3 +0.0 +0.3 +0.4 +0.3
nitrogen source L-Alanine (N) +0.2 -0.1 +0.4 +0.5 +0.3
remove
Ga0059261_3960
plot		 remove
Ga0059261_3961
plot		 remove
Ga0059261_3962		 remove
Ga0059261_3963
plot		 remove
Ga0059261_3964
plot