Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3958 and Ga0059261_3959 are separated by 239 nucleotidesGa0059261_3959 and Ga0059261_3960 are separated by 499 nucleotidesGa0059261_3960 and Ga0059261_3961 are separated by 86 nucleotidesGa0059261_3961 and Ga0059261_3962 overlap by 4 nucleotides Ga0059261_3958: Ga0059261_3958 - Type II secretory pathway, component PulK, at 4,072,859 to 4,073,731 _3958 Ga0059261_3959: Ga0059261_3959 - MerC mercury resistance protein, at 4,073,971 to 4,074,345 _3959 Ga0059261_3960: Ga0059261_3960 - hypothetical protein, at 4,074,845 to 4,075,585 _3960 Ga0059261_3961: Ga0059261_3961 - Urocanate hydratase (EC 4.2.1.49) (from data), at 4,075,672 to 4,077,342 _3961 Ga0059261_3962: Ga0059261_3962 - N-formylglutamate deformylase (EC 3.5.1.68) (from data), at 4,077,339 to 4,078,133 _3962
Group Condition Ga0059261_3958 Ga0059261_3959 Ga0059261_3960 Ga0059261_3961 Ga0059261_3962
nitrogen source L-Histidine (N) -0.1 +0.2 +0.0 -3.4 -3.0
nutrient D-Glucose (C); no added vitamins -0.9 -1.6 -0.1 -0.5 +0.4
nutrient D-Cellobiose (C); no added vitamins -1.2 -0.2 -0.0 -0.9 +0.6
motility inner cut, LB soft agar motility assay -1.0 -0.4 +0.3 -0.3 -0.4
carbon source D-Glucose (C) -0.2 -0.8 -0.1 -0.2 -0.1
nutrient D-Cellobiose (C); no added vitamins -0.9 -0.3 -0.1 -0.8 +0.6
stress Benzalkonium Chloride 0.0005 mg/ml -0.4 -0.4 -0.1 -0.2 -0.3
stress nitrite 2.5 mM +0.1 -0.4 -0.2 -0.3 -0.4
carbon source L-Glutamine (C) -0.1 -0.7 -0.0 -0.2 -0.4
pH LB, pH7 -0.4 -0.4 -0.1 -0.1 -0.2
stress Paraquat dichloride 0.035 mg/ml -0.4 -0.3 -0.2 -0.1 -0.2
stress Thallium(I) acetate 0.01 mg/ml -0.2 -0.6 -0.1 -0.1 -0.1
motility inner cut, LB soft agar motility assay +0.1 -0.4 +0.2 -0.2 -0.7
motility outer cut, LB soft agar motility assay +0.4 -0.9 +0.2 -0.2 -0.6
nutrient D-Glucose (C); no added vitamins -0.6 +0.0 +0.0 -0.6 +0.3
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -1.0 -0.3 -0.0 -0.3 +0.9
carbon source L-Glutamic (C) -0.5 -0.3 -0.1 -0.1 +0.3
carbon source D-Maltose (C) -0.5 -0.2 +0.0 -0.5 +0.5
motility inner cut, LB soft agar motility assay +0.5 -1.0 +0.2 -0.1 -0.2
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.9 +0.2 +0.0 -0.3 +0.6
nitrogen source L-Glutamine (N) +0.6 +0.1 +0.1 -0.5 -0.7
nitrogen source L-Proline (N) +0.1 +0.2 +0.1 -0.5 -0.3
carbon source D-Maltose (C) -0.2 -0.3 +0.0 -0.3 +0.5
carbon source a-Cyclodextrin (C) -0.4 -0.2 -0.0 -0.2 +0.5
carbon source NAG (C) -0.4 -0.1 -0.0 -0.3 +0.5
carbon source a-Cyclodextrin (C) -0.3 -0.2 +0.0 -0.2 +0.6
nitrogen source L-Proline (N) +0.5 +0.5 +0.1 -0.5 -0.1
carbon source D-Glucose (C) -0.2 +0.6 +0.1 -0.2 +0.5
nitrogen source L-Glutamic (N) +0.2 +0.5 +0.3 +0.0 +0.3
motility outer cut, LB soft agar motility assay +0.6 +0.5 +0.4 -0.2 -0.1
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Ga0059261_3958
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Ga0059261_3959
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