Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3897 and Ga0059261_3898 are separated by 338 nucleotidesGa0059261_3898 and Ga0059261_3899 are separated by 61 nucleotidesGa0059261_3899 and Ga0059261_3900 are separated by 155 nucleotidesGa0059261_3900 and Ga0059261_3901 are separated by 210 nucleotides Ga0059261_3897: Ga0059261_3897 - ribosomal protein S1, at 4,007,770 to 4,009,485 _3897 Ga0059261_3898: Ga0059261_3898 - hypothetical protein, at 4,009,824 to 4,010,246 _3898 Ga0059261_3899: Ga0059261_3899 - Alanine dehydrogenase (EC 1.4.1.1) (from data), at 4,010,308 to 4,011,414 _3899 Ga0059261_3900: Ga0059261_3900 - Transcriptional regulators, at 4,011,570 to 4,012,043 _3900 Ga0059261_3901: Ga0059261_3901 - K+ transporter, at 4,012,254 to 4,014,122 _3901
Group Condition Ga0059261_3897 Ga0059261_3898 Ga0059261_3899 Ga0059261_3900 Ga0059261_3901
nitrogen source L-Alanine (N) N.D. -0.3 -2.9 -3.0 N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.5 -1.0 -1.2 N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.2 -1.1 -1.0 N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.6 -0.5 -0.7 N.D.
motility inner cut, LB soft agar motility assay N.D. -0.2 -0.5 -0.7 N.D.
motility inner cut, LB soft agar motility assay N.D. -0.7 -0.2 -0.3 N.D.
pH LB, pH6 N.D. -0.2 -0.4 -0.5 N.D.
stress Vanillin 0.25 mM N.D. -0.5 -0.2 +0.0 N.D.
temperature LB 37C N.D. -0.1 -0.1 -0.4 N.D.
carbon source NAG (C) N.D. -0.1 -0.1 -0.5 N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins N.D. +0.4 -0.5 -0.5 N.D.
stress Tetracycline 0.002 mg/ml N.D. -0.5 -0.2 +0.1 N.D.
temperature LB 37C N.D. +0.1 -0.2 -0.4 N.D.
nitrogen source L-Proline (N) N.D. -0.2 +0.3 -0.2 N.D.
carbon source D-Glucose (C) N.D. -0.4 +0.2 +0.1 N.D.
stress 1-ethyl-3-methylimidazolium acetate 20 mM N.D. +0.4 -0.1 -0.2 N.D.
nutrient L-Glutamic (C); no added vitamins N.D. -0.3 +0.4 +0.1 N.D.
nitrogen source L-Glutamine (N) N.D. -0.3 +0.6 +0.0 N.D.
nutrient L-Glutamic (C); no added vitamins N.D. -0.2 +0.3 +0.2 N.D.
carbon source a-Cyclodextrin (C) N.D. -0.1 +0.3 +0.3 N.D.
motility outer cut, LB soft agar motility assay N.D. +0.1 +0.5 -0.2 N.D.
carbon source D-Cellobiose (C) N.D. +0.2 +0.2 +0.2 N.D.
carbon source D-Xylose (C) N.D. +0.1 +0.3 +0.2 N.D.
carbon source D-Maltose (C) N.D. -0.1 +0.4 +0.4 N.D.
motility outer cut, LB soft agar motility assay N.D. +0.1 +1.1 -0.4 N.D.
motility inner cut, LB soft agar motility assay N.D. -0.4 +0.1 +1.2 N.D.
nutrient D-Cellobiose (C); no added vitamins N.D. -0.3 +0.8 +0.7 N.D.
nutrient D-Cellobiose (C); no added vitamins N.D. +0.0 +1.0 +0.5 N.D.
nutrient D-Glucose (C); no added vitamins N.D. -0.4 +1.2 +1.0 N.D.
nutrient D-Glucose (C); no added vitamins N.D. -0.0 +1.1 +1.2 N.D.
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