Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3874 and Ga0059261_3875 are separated by 2 nucleotidesGa0059261_3875 and Ga0059261_3876 are separated by 70 nucleotidesGa0059261_3876 and Ga0059261_3877 are separated by 227 nucleotidesGa0059261_3877 and Ga0059261_3878 are separated by 50 nucleotides Ga0059261_3874: Ga0059261_3874 - ABC-type antimicrobial peptide transport system, ATPase component, at 3,980,701 to 3,981,432 _3874 Ga0059261_3875: Ga0059261_3875 - ABC-type transport system, involved in lipoprotein release, permease component, at 3,981,435 to 3,982,568 _3875 Ga0059261_3876: Ga0059261_3876 - Signal transduction histidine kinase, at 3,982,639 to 3,983,805 _3876 Ga0059261_3877: Ga0059261_3877 - hypothetical protein, at 3,984,033 to 3,984,194 _3877 Ga0059261_3878: Ga0059261_3878 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 3,984,245 to 3,984,931 _3878
Group Condition Ga0059261_3874 Ga0059261_3875 Ga0059261_3876 Ga0059261_3877 Ga0059261_3878
stress Polymyxin B sulfate 0.1 mg/ml -0.9 -0.5 -1.9 -0.5 -1.9
stress Polymyxin B sulfate 0.05 mg/ml -0.9 -0.3 -1.0 -0.4 -0.9
motility outer cut, LB soft agar motility assay -0.4 -0.6 +0.1 -2.1 +0.3
nutrient D-Cellobiose (C); no added vitamins +0.5 +0.3 -1.1 -0.7 -1.4
nutrient D-Cellobiose (C); no added vitamins +0.7 +0.4 -1.4 -0.4 -1.7
temperature LB 20C -0.1 +0.1 -0.0 -1.7 -0.1
nitrogen source L-Proline (N) -0.1 -0.3 -0.3 -0.9 -0.1
nutrient D-Glucose (C); no added vitamins +0.4 +0.3 -1.0 -0.5 -0.9
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.0 +0.2 -0.8 -0.3 -0.8
temperature LB 20C -0.3 +0.1 -0.2 -1.1 -0.0
nutrient D-Glucose (C); no added vitamins +0.5 +0.3 -1.2 -0.3 -0.8
nutrient L-Glutamic (C); no added vitamins -0.1 -0.0 -0.7 -0.1 -0.5
nitrogen source L-Glutamine (N) -0.5 -0.3 -0.1 -0.3 -0.2
nutrient L-Glutamic (C); no added vitamins -0.2 +0.0 -0.6 -0.1 -0.6
carbon source D-Glucose (C) -0.2 +0.0 -0.1 -1.1 +0.1
stress Gentamicin 0.005 mg/ml -0.1 +0.0 -0.0 -1.1 -0.0
stress Cholin acetate 40 mM +0.1 +0.0 -0.0 -1.1 -0.1
nitrogen source L-Proline (N) -0.3 -0.2 -0.2 -0.3 -0.1
stress Vanillin 0.25 mM -0.1 +0.1 -0.1 -0.9 -0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins -0.0 +0.1 -0.4 -0.5 -0.3
lb LB -0.3 +0.0 -0.3 -0.5 -0.1
lb LB +0.1 -0.0 -0.3 -0.5 -0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.0 +0.1 -0.7 +0.4 -0.7
motility outer cut, LB soft agar motility assay -0.7 +0.1 +0.2 -0.3 -0.1
stress syringaldehyde 1 mM +0.2 -0.0 -0.2 -0.4 -0.1
carbon source L-Glutamic (C) -0.1 +0.1 +0.1 -0.6 +0.1
motility inner cut, LB soft agar motility assay +0.3 -0.1 +0.5 -1.4 +0.3
motility inner cut, LB soft agar motility assay -0.8 -0.3 +0.1 +1.1 -0.2
motility inner cut, LB soft agar motility assay +0.2 -0.2 +0.1 +0.8 -0.2
motility inner cut, LB soft agar motility assay +0.5 +0.1 -0.0 +0.5 +0.1
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