Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3701 and Ga0059261_3702 are separated by 81 nucleotidesGa0059261_3702 and Ga0059261_3703 are separated by 8 nucleotidesGa0059261_3703 and Ga0059261_3704 are separated by 94 nucleotidesGa0059261_3704 and Ga0059261_3705 are separated by 43 nucleotides Ga0059261_3701: Ga0059261_3701 - Pirin-related protein, at 3,816,591 to 3,817,289 _3701 Ga0059261_3702: Ga0059261_3702 - NAD(P)H:quinone oxidoreductase, type IV, at 3,817,371 to 3,817,973 _3702 Ga0059261_3703: Ga0059261_3703 - Uncharacterized conserved protein, at 3,817,982 to 3,818,764 _3703 Ga0059261_3704: Ga0059261_3704 - diguanylate cyclase (GGDEF) domain, at 3,818,859 to 3,821,009 _3704 Ga0059261_3705: Ga0059261_3705 - Pseudouridylate synthases, 23S RNA-specific, at 3,821,053 to 3,821,727 _3705
Group Condition Ga0059261_3701 Ga0059261_3702 Ga0059261_3703 Ga0059261_3704 Ga0059261_3705
motility outer cut, LB soft agar motility assay +0.2 -0.9 -0.2 -0.1 -0.6
motility outer cut, LB soft agar motility assay +0.2 -0.7 -0.3 +0.3 -0.5
nitrogen source L-Proline (N) -0.1 -0.1 -0.1 -0.2 -0.3
nitrogen source L-Glutamine (N) -0.2 -0.5 +0.1 -0.0 -0.1
motility inner cut, LB soft agar motility assay -0.3 -0.6 +0.3 -0.1 +0.2
stress syringaldehyde 1 mM -0.3 -0.2 +0.3 +0.0 -0.2
temperature LB 20C -0.0 -0.3 +0.2 +0.1 -0.3
nutrient D-Glucose (C); no added vitamins -0.4 +0.0 +0.3 +0.1 -0.2
stress Thallium(I) acetate 0.005 mg/ml +0.1 -0.4 -0.0 +0.1 +0.2
stress Rifampicin 0.001 mg/ml +0.1 -0.3 +0.1 +0.2 -0.2
stress Aluminum chloride 4 mM +0.1 -0.2 +0.3 +0.0 -0.2
stress methylglyoxal 0.001 vol% +0.1 +0.3 -0.1 +0.1 -0.2
motility inner cut, LB soft agar motility assay +0.1 -0.1 -0.6 +0.4 +0.4
carbon source D-Glucose (C) +0.1 -0.2 +0.1 +0.2 +0.1
nutrient D-Glucose (C); no added vitamins -0.5 +0.4 +0.4 +0.1 -0.2
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 -0.2 +0.3 +0.2 +0.2
stress Gentamicin 0.005 mg/ml +0.1 +0.4 +0.0 +0.1 -0.1
stress Nalidixic 0.025 mg/ml +0.2 +0.2 +0.3 +0.1 -0.2
motility inner cut, LB soft agar motility assay +0.0 +0.3 +0.3 +0.3 -0.3
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.1 +0.5 +0.2 -0.2
stress Paraquat dichloride 0.045 mg/ml +0.2 +0.2 +0.3 +0.0 -0.1
carbon source D-Glucose (C) +0.1 +0.4 +0.1 +0.3 -0.2
carbon source D-Cellobiose (C) +0.1 +0.1 +0.3 +0.1 +0.1
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.1 +0.3 +0.2 +0.1 +0.3
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.2 -0.1 +0.2 +0.2 +0.2
lb LB +0.0 +0.4 +0.2 +0.0 +0.1
stress A22 0.01 mg/ml +0.2 +0.2 +0.2 +0.0 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.2 +0.2 +0.1 +0.1 +0.2
carbon source L-Glutamic (C) +0.1 +0.2 +0.4 +0.2 +0.0
motility inner cut, LB soft agar motility assay -0.0 +0.2 +1.2 -0.0 +0.3
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