Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3695 and Ga0059261_3696 are separated by 907 nucleotidesGa0059261_3696 and Ga0059261_3697 overlap by 4 nucleotidesGa0059261_3697 and Ga0059261_3698 are separated by 132 nucleotidesGa0059261_3698 and Ga0059261_3699 are separated by 342 nucleotides Ga0059261_3695: Ga0059261_3695 - Predicted metal-dependent hydrolase with the TIM-barrel fold, at 3,808,060 to 3,809,736 _3695 Ga0059261_3696: Ga0059261_3696 - hypothetical protein, at 3,810,644 to 3,811,018 _3696 Ga0059261_3697: Ga0059261_3697 - Predicted transcriptional regulators, at 3,811,015 to 3,811,311 _3697 Ga0059261_3698: Ga0059261_3698 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 3,811,444 to 3,812,151 _3698 Ga0059261_3699: Ga0059261_3699 - TonB dependent receptor/TonB-dependent Receptor Plug Domain, at 3,812,494 to 3,815,496 _3699
Group Condition Ga0059261_3695 Ga0059261_3696 Ga0059261_3697 Ga0059261_3698 Ga0059261_3699
stress Fusidic 0.0005 mg/ml -3.7 +0.2 -0.0 +0.1 +0.0
motility outer cut, LB soft agar motility assay -0.0 -1.3 -0.0 -1.8 -0.1
stress Doxycycline hyclate 0.0001 mg/ml -2.4 -0.1 -0.1 +0.0 +0.0
nitrogen source L-Proline (N) -1.2 -0.1 -0.1 -0.3 -0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -1.6 +0.1 +0.1 -0.0 -0.0
stress Bacitracin 0.12 mg/ml -1.3 -0.2 +0.0 -0.0 -0.0
nitrogen source L-Glutamine (N) -2.0 -0.1 -0.0 +0.6 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -1.7 +0.1 +0.1 +0.1 +0.0
nitrogen source L-Histidine (N) -1.7 -0.0 -0.1 +0.4 +0.0
nitrogen source L-Glutamine (N) -1.8 -0.3 +0.0 +0.7 +0.1
nitrogen source L-Proline (N) -1.5 -0.1 +0.3 +0.3 +0.1
nitrogen source L-Alanine (N) -1.1 -0.3 -0.0 +0.7 +0.1
motility outer cut, LB soft agar motility assay +0.6 +0.2 -0.1 -1.2 +0.1
nitrogen source L-Glutamic (N) -0.6 -0.2 -0.1 +0.5 +0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins -1.0 +0.1 +0.1 +0.4 +0.0
carbon source a-Cyclodextrin (C) -0.7 +0.1 -0.1 +0.7 +0.0
carbon source a-Cyclodextrin (C) -0.7 +0.1 +0.1 +0.6 +0.0
carbon source D-Glucose (C) -0.9 -0.0 +0.2 +0.9 +0.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -0.6 +0.2 -0.0 +0.6 +0.1
stress Nickel (II) chloride 1.5 mM -0.4 -0.1 +0.1 +0.9 -0.0
carbon source D-Cellobiose (C) -0.7 +0.1 -0.0 +1.1 +0.1
carbon source D-Glucose (C) -0.7 -0.0 +0.2 +1.1 +0.1
motility inner cut, LB soft agar motility assay +0.4 -0.6 +0.2 +0.7 +0.1
carbon source L-Glutamic (C) -0.6 +0.1 +0.0 +1.3 +0.1
carbon source D-Glucose (C) -0.2 +0.1 +0.1 +1.0 -0.1
carbon source L-Glutamic (C) -0.7 +0.3 +0.1 +1.3 +0.1
carbon source D-Cellobiose (C) -0.6 +0.4 +0.0 +1.1 +0.1
motility inner cut, LB soft agar motility assay +0.6 -0.0 -0.2 +0.5 +0.2
motility inner cut, LB soft agar motility assay +0.6 +0.5 -0.4 +1.0 +0.0
motility inner cut, LB soft agar motility assay +0.2 +0.9 +0.8 +0.2 -0.0
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