Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_3692 and Ga0059261_3693 are separated by 3 nucleotides
Ga0059261_3693 and Ga0059261_3694 are separated by 420 nucleotides
Ga0059261_3694 and Ga0059261_3695 are separated by 78 nucleotides
Ga0059261_3695 and Ga0059261_3696 are separated by 907 nucleotides
Ga0059261_3692: Ga0059261_3692 - Transglutaminase-like enzymes, putative cysteine proteases, at 3,804,712 to 3,805,521
_3692
Ga0059261_3693: Ga0059261_3693 - Putative arginyl-tRNA:protein arginylyltransferase, at 3,805,525 to 3,806,298
_3693
Ga0059261_3694: Ga0059261_3694 - threonine deaminase (EC 4.3.1.19)
(from data)
, at 3,806,719 to 3,807,981
_3694
Ga0059261_3695: Ga0059261_3695 - Predicted metal-dependent hydrolase with the TIM-barrel fold, at 3,808,060 to 3,809,736
_3695
Ga0059261_3696: Ga0059261_3696 - hypothetical protein, at 3,810,644 to 3,811,018
_3696
Group
Condition
Ga0059261
_3692
Ga0059261
_3693
Ga0059261
_3694
Ga0059261
_3695
Ga0059261
_3696
nitrogen source
L-Alanine (N)
-0.0
-0.7
-6.0
-1.1
-0.3
nitrogen source
L-Histidine (N)
-0.0
-0.6
-5.6
-1.7
-0.0
nitrogen source
L-Glutamine (N)
-0.1
-0.9
-4.6
-1.8
-0.3
nitrogen source
L-Glutamine (N)
+0.2
-2.2
-3.4
-2.0
-0.1
nitrogen source
L-Proline (N)
-0.1
-1.2
-4.5
-1.5
-0.1
nitrogen source
L-Proline (N)
-0.2
-1.7
-3.6
-1.2
-0.1
nitrogen source
L-Glutamic (N)
-0.1
-0.4
-5.7
-0.6
+0.1
nutrient
L-Glutamic (C); no added vitamins
-0.0
-0.3
-5.9
-0.4
+0.1
nitrogen source
L-Glutamic (N)
-0.1
-0.0
-5.5
-0.6
-0.2
nutrient
L-Glutamic (C); no added vitamins
+0.0
-0.2
-5.8
-0.6
+0.2
nutrient
D-Cellobiose (C); no added vitamins
+0.1
-1.8
-4.5
-0.4
+0.2
carbon source
L-Glutamic (C)
-0.0
+0.8
-6.5
-0.6
+0.1
carbon source
D-Cellobiose (C)
+0.0
+0.6
-6.2
-0.7
+0.1
carbon source
NAG (C)
-0.0
-0.3
-5.4
-0.4
-0.0
carbon source
NAG (C)
-0.2
-0.2
-5.1
-0.4
-0.1
nutrient
D-Cellobiose (C); no added vitamins
+0.1
-1.2
-4.6
-0.3
+0.1
carbon source
a-Cyclodextrin (C)
-0.2
+0.4
-5.6
-0.7
+0.1
carbon source
D-Cellobiose (C)
+0.2
+0.6
-6.5
-0.6
+0.4
carbon source
a-Cyclodextrin (C)
-0.0
+0.3
-5.6
-0.7
+0.1
carbon source
D-Fructose (C)
-0.1
+0.1
-5.6
-0.2
+0.0
carbon source
D-Raffinose (C)
-0.0
+0.3
-5.8
-0.0
+0.0
carbon source
D-Raffinose (C)
-0.2
+0.2
-5.8
+0.3
-0.0
carbon source
L-Glutamic (C)
+0.1
+0.9
-5.9
-0.7
+0.3
carbon source
NAG (C)
-0.0
+0.1
-5.6
-0.0
+0.2
carbon source
D-Glucose (C)
-0.0
+0.2
-5.2
-0.2
+0.1
carbon source
D-Glucose (C)
-0.1
+0.2
-4.7
-0.3
-0.2
carbon source
L-Glutamic (C)
+0.0
+0.2
-5.2
+0.0
-0.1
carbon source
D-Cellobiose (C)
-0.2
+0.4
-4.7
-0.1
-0.3
carbon source
D-Glucose (C)
+0.1
+0.5
-5.0
-0.2
+0.1
carbon source
L-Glutamic (C)
-0.1
+0.6
-4.5
-0.3
+0.0
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