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Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_3510 and Ga0059261_3511 overlap by 4 nucleotides
Ga0059261_3511 and Ga0059261_3512 overlap by 4 nucleotides
Ga0059261_3512 and Ga0059261_3513 are separated by 41 nucleotides
Ga0059261_3513 and Ga0059261_3514 are separated by 52 nucleotides
Ga0059261_3510: Ga0059261_3510 - Sortase and related acyltransferases, at 3,633,348 to 3,633,845
_3510
Ga0059261_3511: Ga0059261_3511 - Nucleoside-diphosphate-sugar epimerases, at 3,633,842 to 3,634,747
_3511
Ga0059261_3512: Ga0059261_3512 - glutamate 5-kinase (EC 2.7.2.11)
(from data)
, at 3,634,744 to 3,635,847
_3512
Ga0059261_3513: Ga0059261_3513 - Outer membrane protein V, at 3,635,889 to 3,636,674
_3513
Ga0059261_3514: Ga0059261_3514 - Obg family GTPase CgtA, at 3,636,727 to 3,637,776
_3514
Group
Condition
Ga0059261
_3510
Ga0059261
_3511
Ga0059261
_3512
Ga0059261
_3513
Ga0059261
_3514
carbon source
L-Glutamic (C)
+0.0
N.D.
-8.0
-0.1
N.D.
nutrient
L-Glutamic (C); no added vitamins
+0.1
N.D.
-8.1
+0.0
N.D.
carbon source
D-Cellobiose (C)
+0.1
N.D.
-8.0
+0.0
N.D.
nutrient
L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
+0.1
N.D.
-7.9
+0.1
N.D.
nutrient
D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
-0.0
N.D.
-7.9
+0.1
N.D.
nutrient
D-Glucose (C) and 0.25mM L-Methionine; no added vitamins
+0.1
N.D.
-7.9
+0.1
N.D.
nutrient
D-Cellobiose (C); no added vitamins
+0.1
N.D.
-7.8
+0.1
N.D.
nutrient
L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
+0.1
N.D.
-6.2
+0.1
N.D.
carbon source
D-Glucose (C)
-0.2
N.D.
-5.7
-0.0
N.D.
carbon source
a-Cyclodextrin (C)
+0.0
N.D.
-6.0
+0.1
N.D.
carbon source
D-Glucose (C)
+0.0
N.D.
-5.7
-0.2
N.D.
carbon source
a-Cyclodextrin (C)
-0.1
N.D.
-5.8
+0.1
N.D.
nutrient
L-Glutamic (C); no added vitamins
+0.1
N.D.
-6.1
+0.2
N.D.
carbon source
NAG (C)
+0.0
N.D.
-5.8
+0.1
N.D.
carbon source
D-Raffinose (C)
-0.2
N.D.
-5.6
+0.1
N.D.
carbon source
D-Xylose (C)
-0.1
N.D.
-5.7
+0.0
N.D.
carbon source
D-Maltose (C)
-0.0
N.D.
-5.8
+0.1
N.D.
carbon source
NAG (C)
-0.1
N.D.
-5.8
+0.2
N.D.
nutrient
D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
-0.0
N.D.
-5.8
+0.2
N.D.
nutrient
D-Glucose (C); no added vitamins
+0.1
N.D.
-6.0
+0.3
N.D.
nitrogen source
L-Glutamic (N)
-0.1
N.D.
-5.5
-0.0
N.D.
nitrogen source
L-Glutamine (N)
-0.3
N.D.
-5.3
+0.1
N.D.
carbon source
L-Glutamic (C)
-0.2
N.D.
-5.2
+0.0
N.D.
nitrogen source
L-Histidine (N)
-0.0
N.D.
-5.4
+0.2
N.D.
nitrogen source
L-Alanine (N)
+0.1
N.D.
-5.3
+0.0
N.D.
carbon source
L-Glutamic (C)
+0.0
N.D.
-5.1
+0.0
N.D.
nitrogen source
L-Glutamic (N)
+0.1
N.D.
-5.2
+0.1
N.D.
carbon source
D-Glucose (C)
-0.0
N.D.
-4.7
+0.1
N.D.
carbon source
D-Cellobiose (C)
-0.0
N.D.
-4.5
+0.0
N.D.
nitrogen source
L-Glutamine (N)
-0.0
N.D.
-4.6
+0.1
N.D.
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