Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3449 and Ga0059261_3450 are separated by 22 nucleotidesGa0059261_3450 and Ga0059261_3451 overlap by 4 nucleotidesGa0059261_3451 and Ga0059261_3452 are separated by 134 nucleotidesGa0059261_3452 and Ga0059261_3453 are separated by 63 nucleotides Ga0059261_3449: Ga0059261_3449 - G/U mismatch-specific uracil-DNA glycosylase (EC 3.2.2.-), at 3,575,010 to 3,575,513 _3449 Ga0059261_3450: Ga0059261_3450 - Predicted membrane protein, at 3,575,536 to 3,575,862 _3450 Ga0059261_3451: Ga0059261_3451 - hypothetical protein, at 3,575,859 to 3,576,281 _3451 Ga0059261_3452: Ga0059261_3452 - Cysteine synthase, at 3,576,416 to 3,577,408 _3452 Ga0059261_3453: Ga0059261_3453 - hypothetical protein, at 3,577,472 to 3,577,777 _3453
Group Condition Ga0059261_3449 Ga0059261_3450 Ga0059261_3451 Ga0059261_3452 Ga0059261_3453
stress Choline chloride 40 mM -0.2 -0.0 -1.1 N.D. N.D.
stress Gentamicin 0.005 mg/ml -0.3 -0.2 -0.6 N.D. N.D.
stress Cobalt chloride 0.08 mM +0.1 +0.1 -1.2 N.D. N.D.
carbon source D-Glucose (C) +0.0 -0.0 -1.0 N.D. N.D.
carbon source D-Glucose (C) +0.1 -0.1 -1.0 N.D. N.D.
stress Polymyxin B sulfate 0.1 mg/ml -0.1 -0.1 -0.6 N.D. N.D.
motility inner cut, LB soft agar motility assay +0.4 -0.1 -1.2 N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.1 -0.0 -0.8 N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.2 +0.0 -0.7 N.D. N.D.
carbon source L-Glutamic (C) +0.1 -0.0 -0.8 N.D. N.D.
temperature LB 20C +0.1 +0.1 -0.9 N.D. N.D.
stress 1-ethyl-3-methylimidazolium chloride 5 mM +0.0 +0.1 -0.8 N.D. N.D.
nitrogen source L-Glutamic (N) +0.1 +0.1 -0.7 N.D. N.D.
motility inner cut, LB soft agar motility assay +0.4 +0.3 -1.1 N.D. N.D.
motility outer cut, LB soft agar motility assay +0.2 +0.4 -0.6 N.D. N.D.
stress methylglyoxal 0.001 vol% -0.1 -0.3 +0.6 N.D. N.D.
stress methylglyoxal 0.005 vol% -0.2 -0.0 +0.8 N.D. N.D.
nutrient D-Cellobiose (C); no added vitamins +0.3 -0.4 +0.7 N.D. N.D.
stress perchlorate 50 mM -0.2 -0.0 +0.8 N.D. N.D.
carbon source D-Glucose (C) -0.2 +0.1 +0.8 N.D. N.D.
temperature LB 37C +0.2 +0.1 +0.6 N.D. N.D.
stress Cephalothin 0.3 mg/ml +0.3 +0.1 +0.6 N.D. N.D.
nitrogen source L-Glutamine (N) +0.3 +0.1 +0.6 N.D. N.D.
pH LB, pH7 +0.1 +0.2 +0.8 N.D. N.D.
pH LB, pH6 +0.1 +0.0 +1.0 N.D. N.D.
stress A22 0.02 mg/ml +0.2 +0.2 +0.7 N.D. N.D.
motility outer cut, LB soft agar motility assay +0.3 +0.4 +0.4 N.D. N.D.
nitrogen source L-Alanine (N) +0.2 +0.1 +0.9 N.D. N.D.
pH LB, pH6 +0.1 -0.1 +1.4 N.D. N.D.
pH LB, pH8 +0.3 +0.2 +0.9 N.D. N.D.
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