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Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_3449 and Ga0059261_3450 are separated by 22 nucleotides
Ga0059261_3450 and Ga0059261_3451 overlap by 4 nucleotides
Ga0059261_3451 and Ga0059261_3452 are separated by 134 nucleotides
Ga0059261_3452 and Ga0059261_3453 are separated by 63 nucleotides
Ga0059261_3449: Ga0059261_3449 - G/U mismatch-specific uracil-DNA glycosylase (EC 3.2.2.-), at 3,575,010 to 3,575,513
_3449
Ga0059261_3450: Ga0059261_3450 - Predicted membrane protein, at 3,575,536 to 3,575,862
_3450
Ga0059261_3451: Ga0059261_3451 - hypothetical protein, at 3,575,859 to 3,576,281
_3451
Ga0059261_3452: Ga0059261_3452 - Cysteine synthase, at 3,576,416 to 3,577,408
_3452
Ga0059261_3453: Ga0059261_3453 - hypothetical protein, at 3,577,472 to 3,577,777
_3453
Group
Condition
Ga0059261
_3449
Ga0059261
_3450
Ga0059261
_3451
Ga0059261
_3452
Ga0059261
_3453
stress
Choline chloride 40 mM
-0.2
-0.0
-1.1
N.D.
N.D.
stress
Gentamicin 0.005 mg/ml
-0.3
-0.2
-0.6
N.D.
N.D.
stress
Cobalt chloride 0.08 mM
+0.1
+0.1
-1.2
N.D.
N.D.
carbon source
D-Glucose (C)
+0.0
-0.0
-1.0
N.D.
N.D.
carbon source
D-Glucose (C)
+0.1
-0.1
-1.0
N.D.
N.D.
stress
Polymyxin B sulfate 0.1 mg/ml
-0.1
-0.1
-0.6
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
+0.4
-0.1
-1.2
N.D.
N.D.
stress
1-ethyl-3-methylimidazolium acetate 20 mM
-0.1
-0.0
-0.8
N.D.
N.D.
stress
1-ethyl-3-methylimidazolium acetate 5 mM
-0.2
+0.0
-0.7
N.D.
N.D.
carbon source
L-Glutamic (C)
+0.1
-0.0
-0.8
N.D.
N.D.
temperature
LB 20C
+0.1
+0.1
-0.9
N.D.
N.D.
stress
1-ethyl-3-methylimidazolium chloride 5 mM
+0.0
+0.1
-0.8
N.D.
N.D.
nitrogen source
L-Glutamic (N)
+0.1
+0.1
-0.7
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
+0.4
+0.3
-1.1
N.D.
N.D.
motility
outer cut, LB soft agar motility assay
+0.2
+0.4
-0.6
N.D.
N.D.
stress
methylglyoxal 0.001 vol%
-0.1
-0.3
+0.6
N.D.
N.D.
stress
methylglyoxal 0.005 vol%
-0.2
-0.0
+0.8
N.D.
N.D.
nutrient
D-Cellobiose (C); no added vitamins
+0.3
-0.4
+0.7
N.D.
N.D.
stress
perchlorate 50 mM
-0.2
-0.0
+0.8
N.D.
N.D.
carbon source
D-Glucose (C)
-0.2
+0.1
+0.8
N.D.
N.D.
temperature
LB 37C
+0.2
+0.1
+0.6
N.D.
N.D.
stress
Cephalothin 0.3 mg/ml
+0.3
+0.1
+0.6
N.D.
N.D.
nitrogen source
L-Glutamine (N)
+0.3
+0.1
+0.6
N.D.
N.D.
pH
LB, pH7
+0.1
+0.2
+0.8
N.D.
N.D.
pH
LB, pH6
+0.1
+0.0
+1.0
N.D.
N.D.
stress
A22 0.02 mg/ml
+0.2
+0.2
+0.7
N.D.
N.D.
motility
outer cut, LB soft agar motility assay
+0.3
+0.4
+0.4
N.D.
N.D.
nitrogen source
L-Alanine (N)
+0.2
+0.1
+0.9
N.D.
N.D.
pH
LB, pH6
+0.1
-0.1
+1.4
N.D.
N.D.
pH
LB, pH8
+0.3
+0.2
+0.9
N.D.
N.D.
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