Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3382 and Ga0059261_3383 are separated by 97 nucleotidesGa0059261_3383 and Ga0059261_3384 are separated by 86 nucleotidesGa0059261_3384 and Ga0059261_3385 are separated by 125 nucleotidesGa0059261_3385 and Ga0059261_3386 are separated by 313 nucleotides Ga0059261_3382: Ga0059261_3382 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 3,512,775 to 3,513,512 _3382 Ga0059261_3383: Ga0059261_3383 - transcriptional regulator, TetR family, at 3,513,610 to 3,514,236 _3383 Ga0059261_3384: Ga0059261_3384 - glutamine synthetase, type I, at 3,514,323 to 3,515,735 _3384 Ga0059261_3385: Ga0059261_3385 - nitrogen regulatory protein P-II family, at 3,515,861 to 3,516,199 _3385 Ga0059261_3386: Ga0059261_3386 - Uncharacterized protein conserved in bacteria, at 3,516,513 to 3,518,327 _3386
Group Condition Ga0059261_3382 Ga0059261_3383 Ga0059261_3384 Ga0059261_3385 Ga0059261_3386
motility outer cut, LB soft agar motility assay -0.8 -0.3 N.D. N.D. -0.0
carbon source D-Glucose (C) -0.3 -0.4 N.D. N.D. -0.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -0.2 -0.4 N.D. N.D. -0.0
stress Phosphomycin 0.005 mg/ml -0.1 -0.5 N.D. N.D. +0.0
stress Cholin acetate 10 mM -0.1 -0.5 N.D. N.D. +0.0
nitrogen source L-Glutamine (N) -0.2 -0.2 N.D. N.D. -0.0
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -0.1 -0.4 N.D. N.D. -0.0
stress acetate 20 mM -0.0 -0.5 N.D. N.D. +0.1
stress Lomefloxacin 0.01 mM -0.1 -0.3 N.D. N.D. -0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.0 -0.3 N.D. N.D. -0.1
stress acetate 40 mM -0.0 -0.5 N.D. N.D. +0.0
nitrogen source L-Glutamic (N) -0.3 -0.1 N.D. N.D. -0.0
stress Paraquat dichloride 0.045 mg/ml -0.2 -0.3 N.D. N.D. +0.0
carbon source L-Glutamic (C) -0.1 -0.3 N.D. N.D. +0.0
stress Bacitracin 0.12 mg/ml +0.0 -0.4 N.D. N.D. -0.0
stress Cholin acetate 20 mM +0.0 -0.4 N.D. N.D. +0.1
stress Fusidic 0.0005 mg/ml +0.1 -0.3 N.D. N.D. -0.0
carbon source NAG (C) +0.1 -0.3 N.D. N.D. -0.1
carbon source D-Xylose (C) +0.1 -0.3 N.D. N.D. +0.0
nutrient D-Cellobiose (C); no added vitamins -0.3 +0.2 N.D. N.D. -0.2
stress Choline chloride 10 mM +0.1 -0.2 N.D. N.D. +0.1
motility outer cut, LB soft agar motility assay +0.4 -0.1 N.D. N.D. -0.2
nitrogen source L-Proline (N) -0.2 +0.3 N.D. N.D. +0.1
pH LB, pH8 +0.3 -0.2 N.D. N.D. +0.0
stress Choline chloride 20 mM +0.3 -0.2 N.D. N.D. +0.0
stress Nalidixic 0.05 mg/ml +0.3 +0.2 N.D. N.D. -0.0
motility inner cut, LB soft agar motility assay +0.3 +0.2 N.D. N.D. +0.0
nutrient D-Cellobiose (C); no added vitamins +0.3 +0.2 N.D. N.D. -0.0
nutrient D-Glucose (C); no added vitamins +0.0 +0.6 N.D. N.D. -0.1
nutrient D-Glucose (C); no added vitamins -0.1 +0.5 N.D. N.D. +0.1
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