Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3298 and Ga0059261_3299 are separated by 71 nucleotidesGa0059261_3299 and Ga0059261_3300 are separated by 118 nucleotidesGa0059261_3300 and Ga0059261_3301 are separated by 3 nucleotidesGa0059261_3301 and Ga0059261_3302 are separated by 53 nucleotides Ga0059261_3298: Ga0059261_3298 - Opacity protein and related surface antigens, at 3,426,069 to 3,426,887 _3298 Ga0059261_3299: Ga0059261_3299 - Secreted and surface protein containing fasciclin-like repeats, at 3,426,959 to 3,427,516 _3299 Ga0059261_3300: Ga0059261_3300 - hypothetical protein, at 3,427,635 to 3,428,603 _3300 Ga0059261_3301: Ga0059261_3301 - Cyanate permease, at 3,428,607 to 3,429,794 _3301 Ga0059261_3302: Ga0059261_3302 - Helix-turn-helix domain, at 3,429,848 to 3,430,393 _3302
Group Condition Ga0059261_3298 Ga0059261_3299 Ga0059261_3300 Ga0059261_3301 Ga0059261_3302
motility inner cut, LB soft agar motility assay +0.4 -0.3 -0.3 -0.4 N.D.
stress Carbenicillin 0.03 mg/ml -0.1 -0.0 -0.1 -0.4 N.D.
pH LB, pH8 -0.1 -0.0 -0.2 -0.3 N.D.
motility inner cut, LB soft agar motility assay -0.2 -0.0 +0.2 -0.6 N.D.
stress Gentamicin 0.005 mg/ml -0.0 -0.1 -0.1 -0.3 N.D.
motility inner cut, LB soft agar motility assay -0.1 +0.2 +0.2 -0.8 N.D.
motility inner cut, LB soft agar motility assay -0.1 +0.1 -0.3 -0.2 N.D.
pH LB, pH6 -0.1 -0.0 -0.1 -0.3 N.D.
pH LB, pH6 -0.1 +0.1 -0.1 -0.3 N.D.
pH LB, pH7 -0.1 +0.1 -0.2 -0.2 N.D.
stress Rifampicin 0.001 mg/ml -0.0 +0.1 -0.1 -0.3 N.D.
motility outer cut, LB soft agar motility assay +0.3 -0.4 +0.1 -0.4 N.D.
stress L-Lysine 50 mM +0.1 +0.1 -0.0 -0.3 N.D.
carbon source NAG (C) +0.1 +0.1 -0.1 -0.2 N.D.
carbon source D-Glucose (C) +0.0 +0.1 +0.1 -0.3 N.D.
nitrogen source L-Proline (N) -0.0 +0.1 +0.1 -0.3 N.D.
stress D-Cycloserine 0.064 mg/ml -0.0 +0.1 +0.2 -0.3 N.D.
stress Tetracycline 0.002 mg/ml +0.1 +0.1 +0.1 -0.3 N.D.
carbon source D-Cellobiose (C) -0.1 +0.1 -0.1 +0.2 N.D.
stress Choline Lysine 5 mM +0.0 +0.0 -0.2 +0.3 N.D.
stress Cisplatin 0.01 mg/ml -0.0 +0.1 -0.1 +0.2 N.D.
carbon source D-Xylose (C) -0.0 +0.1 -0.1 +0.4 N.D.
stress nitrate 100 mM +0.1 -0.1 +0.1 +0.2 N.D.
carbon source D-Raffinose (C) +0.0 +0.2 -0.1 +0.3 N.D.
carbon source a-Cyclodextrin (C) +0.0 +0.2 -0.1 +0.3 N.D.
nutrient D-Glucose (C); no added vitamins +0.1 -0.2 +0.2 +0.4 N.D.
stress Chloride 200 mM +0.1 +0.1 -0.1 +0.4 N.D.
carbon source D-Cellobiose (C) +0.0 +0.1 +0.1 +0.3 N.D.
stress Chloride 100 mM +0.2 +0.0 +0.1 +0.3 N.D.
motility outer cut, LB soft agar motility assay +0.1 +0.5 +0.0 +0.5 N.D.
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