Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3294 and Ga0059261_3295 are separated by 19 nucleotidesGa0059261_3295 and Ga0059261_3296 are separated by 11 nucleotidesGa0059261_3296 and Ga0059261_3297 are separated by 289 nucleotidesGa0059261_3297 and Ga0059261_3298 are separated by 161 nucleotides Ga0059261_3294: Ga0059261_3294 - hypothetical protein, at 3,421,509 to 3,421,847 _3294 Ga0059261_3295: Ga0059261_3295 - Uncharacterized conserved protein, at 3,421,867 to 3,422,244 _3295 Ga0059261_3296: Ga0059261_3296 - aconitate hydratase 1, at 3,422,256 to 3,424,928 _3296 Ga0059261_3297: Ga0059261_3297 - Uncharacterized protein conserved in bacteria, at 3,425,218 to 3,425,907 _3297 Ga0059261_3298: Ga0059261_3298 - Opacity protein and related surface antigens, at 3,426,069 to 3,426,887 _3298
Group Condition Ga0059261_3294 Ga0059261_3295 Ga0059261_3296 Ga0059261_3297 Ga0059261_3298
motility inner cut, LB soft agar motility assay N.D. -0.3 N.D. -0.3 -0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.1 N.D. -0.3 -0.1
nitrogen source L-Glutamic (N) N.D. -0.2 N.D. -0.2 -0.1
stress Dimethyl Sulfoxide 5 vol% N.D. -0.1 N.D. -0.2 -0.0
stress 1-ethyl-3-methylimidazolium chloride 10 mM N.D. -0.1 N.D. -0.2 -0.1
stress nitrite 5 mM N.D. +0.0 N.D. -0.3 -0.0
carbon source D-Glucose (C) N.D. +0.1 N.D. -0.3 -0.0
motility inner cut, LB soft agar motility assay N.D. -0.0 N.D. -0.6 +0.4
temperature LB 37C N.D. +0.1 N.D. -0.2 -0.1
temperature LB 20C N.D. -0.2 N.D. +0.1 -0.1
nutrient D-Glucose (C); no added vitamins N.D. +0.1 N.D. -0.4 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.1 N.D. -0.2 +0.2
pH LB, pH6 N.D. -0.2 N.D. +0.2 -0.1
stress Cholin acetate 10 mM N.D. -0.1 N.D. +0.1 -0.1
stress Chloride 100 mM N.D. -0.0 N.D. -0.2 +0.2
nutrient D-Glucose (C); no added vitamins N.D. +0.2 N.D. -0.3 +0.1
carbon source L-Glutamic (C) N.D. -0.2 N.D. +0.1 +0.1
stress Sisomicin 0.12 mg/ml N.D. +0.2 N.D. -0.2 +0.0
carbon source a-Cyclodextrin (C) N.D. -0.2 N.D. +0.2 +0.0
motility inner cut, LB soft agar motility assay N.D. +0.3 N.D. +0.0 -0.1
stress Chloramphenicol 0.0005 mg/ml N.D. +0.1 N.D. +0.3 -0.0
motility outer cut, LB soft agar motility assay N.D. -0.3 N.D. +0.3 +0.3
stress 5-Hydroxymethylfurfural 1 mM N.D. +0.2 N.D. +0.1 +0.1
carbon source D-Glucose (C) N.D. +0.2 N.D. +0.1 +0.0
stress Aluminum chloride 4 mM N.D. +0.2 N.D. +0.2 +0.0
carbon source casaminos (C) N.D. +0.1 N.D. +0.3 +0.1
carbon source L-Glutamine (C) N.D. +0.2 N.D. +0.3 +0.0
stress Cisplatin 0.025 mg/ml N.D. +0.1 N.D. +0.3 +0.0
carbon source D-Fructose (C) N.D. +0.1 N.D. +0.4 +0.0
motility inner cut, LB soft agar motility assay N.D. +0.2 N.D. +0.8 -0.2
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