Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3220 and Ga0059261_3221 are separated by 17 nucleotidesGa0059261_3221 and Ga0059261_3222 are separated by 74 nucleotidesGa0059261_3222 and Ga0059261_3223 are separated by 71 nucleotidesGa0059261_3223 and Ga0059261_3224 overlap by 4 nucleotides Ga0059261_3220: Ga0059261_3220 - Cytochrome b subunit of the bc complex, at 3,351,474 to 3,352,763 _3220 Ga0059261_3221: Ga0059261_3221 - Cytochrome c1, at 3,352,781 to 3,353,635 _3221 Ga0059261_3222: Ga0059261_3222 - adenine phosphoribosyltransferase (EC 2.4.2.7), at 3,353,710 to 3,354,243 _3222 Ga0059261_3223: Ga0059261_3223 - hypothetical protein, at 3,354,315 to 3,354,848 _3223 Ga0059261_3224: Ga0059261_3224 - Acyl dehydratase, at 3,354,845 to 3,355,291 _3224
Group Condition Ga0059261_3220 Ga0059261_3221 Ga0059261_3222 Ga0059261_3223 Ga0059261_3224
carbon source a-Cyclodextrin (C) -2.1 -2.5 -0.1 +0.0 -0.1
nutrient L-Glutamic (C); no added vitamins -2.1 -2.0 -0.1 +0.1 -0.1
carbon source a-Cyclodextrin (C) -2.0 -2.4 +0.2 +0.1 +0.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -2.0 -1.8 -0.1 +0.0 +0.0
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -1.9 -2.0 +0.0 +0.0 +0.0
nutrient L-Glutamic (C); no added vitamins -1.9 -1.9 +0.0 +0.1 +0.1
stress Paraquat dichloride 0.035 mg/ml -1.4 -1.2 -0.2 -0.1 -0.2
stress Paraquat dichloride 0.045 mg/ml -1.3 -1.4 -0.1 +0.1 -0.1
carbon source D-Raffinose (C) -1.2 -1.3 +0.2 +0.0 +0.0
stress Choline chloride 40 mM -0.8 -0.9 -0.1 +0.0 -0.3
carbon source L-Glutamic (C) -0.9 -0.9 -0.0 -0.0 -0.2
carbon source D-Raffinose (C) -0.7 -0.9 -0.3 -0.0 -0.0
stress 1-ethyl-3-methylimidazolium chloride 20 mM -1.0 -1.1 +0.4 +0.0 -0.0
carbon source D-Fructose (C) -0.6 -0.8 -0.3 -0.0 +0.1
carbon source L-Glutamic (C) -0.8 -0.8 -0.1 +0.1 -0.0
carbon source NAG (C) -0.5 -0.9 -0.1 +0.0 -0.0
carbon source D-Maltose (C) -0.8 -0.9 +0.1 +0.1 +0.1
stress nitrite 2.5 mM -0.5 -0.4 -0.4 -0.2 +0.1
carbon source L-Glutamic (C) -0.6 -0.6 -0.2 +0.1 -0.0
carbon source D-Maltose (C) -0.5 -0.6 -0.2 +0.1 -0.1
stress 1-ethyl-3-methylimidazolium chloride 10 mM -0.8 -0.6 +0.2 +0.0 -0.1
motility outer cut, LB soft agar motility assay -0.5 -0.4 -0.5 +0.1 +0.1
motility inner cut, LB soft agar motility assay -0.4 -0.2 -0.9 +0.1 +0.2
carbon source NAG (C) -0.5 -0.8 -0.0 +0.1 +0.1
stress Sisomicin 0.12 mg/ml -0.6 -0.4 -0.1 +0.0 +0.2
motility outer cut, LB soft agar motility assay -0.6 -0.5 -0.1 +0.3 +0.9
nitrogen source L-Histidine (N) +0.4 +0.3 -0.4 +0.1 +0.2
nitrogen source L-Alanine (N) +0.6 +0.6 -0.1 +0.2 +0.1
nutrient D-Glucose (C); no added vitamins +1.2 +1.5 -0.1 +0.1 +0.0
nutrient D-Glucose (C); no added vitamins +1.3 +1.5 +0.3 +0.2 -0.1
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Ga0059261_3220
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Ga0059261_3221
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Ga0059261_3223
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Ga0059261_3224
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