Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3184 and Ga0059261_3185 are separated by 88 nucleotidesGa0059261_3185 and Ga0059261_3186 are separated by 24 nucleotidesGa0059261_3186 and Ga0059261_3187 are separated by 46 nucleotidesGa0059261_3187 and Ga0059261_3188 overlap by 4 nucleotides Ga0059261_3184: Ga0059261_3184 - Predicted methyltransferase, at 3,317,310 to 3,318,056 _3184 Ga0059261_3185: Ga0059261_3185 - amidohydrolase, at 3,318,145 to 3,319,464 _3185 Ga0059261_3186: Ga0059261_3186 - Excinuclease ABC subunit C, at 3,319,489 to 3,321,462 _3186 Ga0059261_3187: Ga0059261_3187 - Polysaccharide deacetylase, at 3,321,509 to 3,322,462 _3187 Ga0059261_3188: Ga0059261_3188 - Acetyltransferase (GNAT) domain, at 3,322,459 to 3,323,376 _3188
Group Condition Ga0059261_3184 Ga0059261_3185 Ga0059261_3186 Ga0059261_3187 Ga0059261_3188
stress Cisplatin 0.025 mg/ml -0.1 -0.0 -3.8 -0.3 -0.0
stress Cisplatin 0.01 mg/ml -0.0 -0.1 -3.2 -0.1 +0.1
stress methylglyoxal 0.005 vol% -0.1 -0.1 -2.2 -0.3 -0.2
stress methylglyoxal 0.001 vol% +0.1 -0.1 -2.5 +0.0 -0.1
stress nitrite 2.5 mM -0.4 -0.2 -0.6 -0.8 -0.3
temperature LB 20C +0.1 -0.1 -1.0 -0.3 -0.3
pH LB, pH7 -0.0 -0.1 -0.8 -0.4 -0.0
stress Chlorite 1.25 mM -0.3 -0.0 -0.7 -0.3 -0.0
stress Phosphomycin 0.005 mg/ml -0.1 +0.1 -0.8 -0.1 -0.3
temperature LB 20C +0.2 +0.0 -1.5 -0.2 +0.5
stress D-Cycloserine 0.064 mg/ml +0.2 +0.1 -1.1 -0.0 +0.2
motility inner cut, LB soft agar motility assay -0.1 -0.0 -1.1 +0.0 +0.7
motility outer cut, LB soft agar motility assay +0.6 +0.1 -0.9 -0.0 +0.1
stress Nickel (II) chloride 1.5 mM +0.2 -0.1 -0.4 -0.3 +0.7
stress Cephalothin 0.3 mg/ml +0.4 +0.1 -0.9 -0.0 +0.6
motility outer cut, LB soft agar motility assay +0.4 +0.5 -0.8 +0.4 -0.0
carbon source D-Glucose (C) -0.2 +0.2 +0.3 -0.2 +0.5
motility inner cut, LB soft agar motility assay +0.1 +0.3 -0.9 +1.0 +0.6
nitrogen source L-Glutamic (N) +0.3 +0.1 -0.1 +0.4 +0.7
nutrient L-Glutamic (C); no added vitamins +0.1 +0.4 +0.2 +0.2 +0.5
nitrogen source L-Glutamic (N) +0.5 +0.1 -0.1 +0.3 +0.7
nutrient D-Cellobiose (C); no added vitamins -0.1 +0.6 +0.2 +0.3 +0.6
nitrogen source L-Alanine (N) +0.3 +0.1 +0.4 +0.1 +0.6
nutrient D-Cellobiose (C); no added vitamins -0.2 +0.6 +0.2 +0.3 +0.7
nutrient D-Glucose (C); no added vitamins -0.0 +0.4 +0.2 +0.5 +0.5
carbon source L-Glutamic (C) +0.2 +0.2 +0.2 +0.6 +0.4
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.5 +0.3 +0.3 +0.5
motility inner cut, LB soft agar motility assay +0.7 +0.1 -0.7 +0.9 +0.9
nutrient D-Glucose (C); no added vitamins +0.0 +0.5 +0.4 +0.7 +0.5
motility inner cut, LB soft agar motility assay +0.1 -0.1 -0.1 +1.8 +1.1
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