Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3143 and Ga0059261_3144 are separated by 106 nucleotidesGa0059261_3144 and Ga0059261_3145 are separated by 7 nucleotidesGa0059261_3145 and Ga0059261_3146 are separated by 104 nucleotidesGa0059261_3146 and Ga0059261_3147 overlap by 54 nucleotides Ga0059261_3143: Ga0059261_3143 - Zn-dependent hydrolases, including glyoxylases, at 3,284,782 to 3,285,690 _3143 Ga0059261_3144: Ga0059261_3144 - Transcriptional regulator, at 3,285,797 to 3,286,666 _3144 Ga0059261_3145: Ga0059261_3145 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3), at 3,286,674 to 3,287,798 _3145 Ga0059261_3146: Ga0059261_3146 - Acyltransferase family, at 3,287,903 to 3,289,111 _3146 Ga0059261_3147: Ga0059261_3147 - transcriptional regulator, LytTR family, at 3,289,058 to 3,289,903 _3147
Group Condition Ga0059261_3143 Ga0059261_3144 Ga0059261_3145 Ga0059261_3146 Ga0059261_3147
stress Cephalothin 0.3 mg/ml -3.7 -3.0 N.D. -0.0 +0.1
stress Carbenicillin 0.03 mg/ml -0.7 -0.2 N.D. -0.0 -0.1
motility inner cut, LB soft agar motility assay +0.1 -0.8 N.D. -0.1 -0.4
carbon source D-Raffinose (C) -0.1 -0.7 N.D. +0.0 +0.1
stress Aluminum chloride 4 mM +0.1 -0.6 N.D. +0.0 +0.2
temperature LB 20C +0.1 -0.6 N.D. +0.1 -0.0
motility outer cut, LB soft agar motility assay +0.4 -0.1 N.D. +0.1 -0.7
nutrient D-Cellobiose (C); no added vitamins +0.1 +0.2 N.D. +0.2 -0.2
motility inner cut, LB soft agar motility assay -0.4 +0.7 N.D. +0.0 -0.1
motility inner cut, LB soft agar motility assay +0.2 +0.5 N.D. +0.1 -0.4
temperature LB 37C +0.0 +0.5 N.D. -0.0 -0.2
pH LB, pH7 +0.1 +0.5 N.D. -0.1 -0.0
nutrient L-Glutamic (C); no added vitamins +0.2 -0.1 N.D. +0.3 +0.2
stress 1-ethyl-3-methylimidazolium chloride 20 mM +0.1 +0.4 N.D. +0.1 -0.0
stress Vanillin 0.25 mM +0.1 +0.7 N.D. -0.1 -0.0
carbon source D-Cellobiose (C) +0.0 +0.3 N.D. +0.2 +0.1
stress Lomefloxacin 0.01 mM +0.0 +0.7 N.D. -0.0 -0.0
stress acetate 20 mM +0.1 +0.6 N.D. +0.0 +0.0
stress 1-ethyl-3-methylimidazolium lysine 2.5 mM -0.0 +0.7 N.D. +0.1 -0.0
stress Doxycycline hyclate 0.0001 mg/ml +0.0 +0.6 N.D. +0.0 +0.0
pH LB, pH7 +0.2 +0.5 N.D. +0.0 -0.0
carbon source D-Cellobiose (C) +0.1 +0.4 N.D. +0.2 +0.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.5 N.D. +0.2 +0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.0 +0.4 N.D. +0.2 +0.2
pH LB, pH6 +0.0 +0.7 N.D. +0.1 +0.0
nutrient D-Cellobiose (C); no added vitamins +0.2 +0.5 N.D. +0.2 +0.0
nitrogen source L-Glutamine (N) -0.1 +0.7 N.D. +0.1 +0.2
carbon source L-Glutamic (C) +0.2 +0.2 N.D. +0.3 +0.2
stress nitrite 2.5 mM +0.1 +0.6 N.D. +0.1 +0.1
motility inner cut, LB soft agar motility assay +0.0 +1.7 N.D. +0.5 -0.0
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