Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3131 and Ga0059261_3132 are separated by 252 nucleotidesGa0059261_3132 and Ga0059261_3133 overlap by 4 nucleotidesGa0059261_3133 and Ga0059261_3134 are separated by 358 nucleotidesGa0059261_3134 and Ga0059261_3135 are separated by 122 nucleotides Ga0059261_3131: Ga0059261_3131 - Nucleoside-diphosphate-sugar epimerases, at 3,273,640 to 3,274,662 _3131 Ga0059261_3132: Ga0059261_3132 - hypothetical protein, at 3,274,915 to 3,275,436 _3132 Ga0059261_3133: Ga0059261_3133 - UTP--glucose-1-phosphate uridylyltransferase, at 3,275,433 to 3,276,311 _3133 Ga0059261_3134: Ga0059261_3134 - hypothetical protein, at 3,276,670 to 3,277,086 _3134 Ga0059261_3135: Ga0059261_3135 - hypothetical protein, at 3,277,209 to 3,277,994 _3135
Group Condition Ga0059261_3131 Ga0059261_3132 Ga0059261_3133 Ga0059261_3134 Ga0059261_3135
motility inner cut, LB soft agar motility assay N.D. -0.6 N.D. -0.1 N.D.
motility inner cut, LB soft agar motility assay N.D. -0.5 N.D. -0.2 N.D.
pH LB, pH6 N.D. -0.3 N.D. -0.2 N.D.
pH LB, pH8 N.D. -0.3 N.D. -0.1 N.D.
motility inner cut, LB soft agar motility assay N.D. +0.4 N.D. -0.5 N.D.
stress 5-Hydroxymethylfurfural 1 mM N.D. -0.2 N.D. +0.3 N.D.
stress Choline chloride 40 mM N.D. -0.1 N.D. +0.3 N.D.
carbon source D-Raffinose (C) N.D. +0.3 N.D. -0.1 N.D.
carbon source L-Glutamine (C) N.D. +0.4 N.D. -0.1 N.D.
stress nitrite 5 mM N.D. +0.1 N.D. +0.3 N.D.
stress perchlorate 25 mM N.D. +0.3 N.D. +0.1 N.D.
stress Furfuryl Alcohol 0.125 vol% N.D. +0.2 N.D. +0.2 N.D.
stress syringaldehyde 0.5 mM N.D. +0.2 N.D. +0.2 N.D.
stress Gentamicin 0.005 mg/ml N.D. +0.1 N.D. +0.3 N.D.
nutrient L-Glutamic (C); no added vitamins N.D. +0.2 N.D. +0.3 N.D.
stress Gentamicin 0.015 mg/ml N.D. +0.2 N.D. +0.2 N.D.
nitrogen source L-Glutamine (N) N.D. +0.6 N.D. -0.2 N.D.
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins N.D. +0.3 N.D. +0.1 N.D.
carbon source L-Glutamic (C) N.D. +0.2 N.D. +0.3 N.D.
stress nitrite 2.5 mM N.D. +0.3 N.D. +0.2 N.D.
stress Cholin acetate 20 mM N.D. +0.3 N.D. +0.2 N.D.
stress Rifampicin 0.001 mg/ml N.D. +0.3 N.D. +0.2 N.D.
lb LB N.D. +0.3 N.D. +0.2 N.D.
stress Choline chloride 20 mM N.D. +0.3 N.D. +0.3 N.D.
stress 1-ethyl-3-methylimidazolium chloride 10 mM N.D. +0.3 N.D. +0.3 N.D.
nutrient D-Cellobiose (C); no added vitamins N.D. +0.4 N.D. +0.2 N.D.
motility outer cut, LB soft agar motility assay N.D. +0.6 N.D. -0.0 N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. +0.5 N.D. +0.2 N.D.
nutrient D-Cellobiose (C); no added vitamins N.D. +0.4 N.D. +0.3 N.D.
nutrient D-Glucose (C); no added vitamins N.D. +0.6 N.D. +0.2 N.D.
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