Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_3001 and Ga0059261_3002 are separated by 400 nucleotidesGa0059261_3002 and Ga0059261_3003 are separated by 57 nucleotidesGa0059261_3003 and Ga0059261_3004 are separated by 256 nucleotidesGa0059261_3004 and Ga0059261_3005 are separated by 156 nucleotides Ga0059261_3001: Ga0059261_3001 - Arabinose efflux permease, at 3,134,233 to 3,135,747 _3001 Ga0059261_3002: Ga0059261_3002 - Zn-dependent dipeptidase, microsomal dipeptidase homolog, at 3,136,148 to 3,137,299 _3002 Ga0059261_3003: Ga0059261_3003 - dihydroorotase (EC 3.5.2.3), at 3,137,357 to 3,138,877 _3003 Ga0059261_3004: Ga0059261_3004 - Beta-lactamase class C and other penicillin binding proteins, at 3,139,134 to 3,140,636 _3004 Ga0059261_3005: Ga0059261_3005 - TonB dependent receptor/TonB-dependent Receptor Plug Domain, at 3,140,793 to 3,143,531 _3005
Group Condition Ga0059261_3001 Ga0059261_3002 Ga0059261_3003 Ga0059261_3004 Ga0059261_3005
motility outer cut, LB soft agar motility assay -0.1 +0.3 -0.3 -0.3 +0.1
stress Cisplatin 0.025 mg/ml -0.0 -0.2 +0.0 -0.0 +0.0
nutrient D-Cellobiose (C); no added vitamins +0.0 +0.1 -0.0 -0.0 -0.1
pH LB, pH8 +0.0 +0.1 -0.1 +0.1 -0.1
temperature LB 37C +0.1 -0.1 -0.1 +0.0 +0.1
stress Sisomicin 0.12 mg/ml +0.0 -0.2 +0.1 +0.1 +0.1
nitrogen source L-Glutamine (N) +0.0 -0.1 +0.1 +0.0 +0.1
stress Bacitracin 0.12 mg/ml -0.0 -0.0 -0.1 +0.1 +0.1
stress L-Lysine 50 mM +0.1 +0.1 -0.0 -0.0 +0.0
lb LB +0.1 +0.0 +0.1 +0.1 -0.1
carbon source D-Cellobiose (C) +0.0 +0.1 -0.1 +0.0 +0.1
motility inner cut, LB soft agar motility assay -0.0 +0.2 -0.1 +0.2 -0.0
stress A22 0.02 mg/ml +0.1 +0.1 -0.1 +0.1 +0.1
lb LB +0.1 +0.0 -0.1 +0.1 +0.1
stress Lomefloxacin 0.02 mM +0.1 +0.1 -0.1 +0.1 +0.1
lb LB +0.1 +0.1 -0.1 +0.1 +0.1
nutrient D-Glucose (C); no added vitamins +0.2 +0.0 -0.0 +0.1 +0.0
stress Dimethyl Sulfoxide 5 vol% +0.1 +0.1 +0.1 +0.0 +0.0
temperature LB 37C +0.1 +0.1 -0.0 +0.0 +0.1
temperature LB 20C +0.1 -0.1 +0.0 +0.1 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.0 +0.1 +0.0 +0.1 +0.1
carbon source L-Glutamic (C) +0.0 +0.1 +0.1 +0.0 +0.1
nutrient L-Glutamic (C); no added vitamins +0.0 +0.2 +0.0 +0.0 +0.1
nitrogen source L-Alanine (N) +0.1 +0.1 +0.0 +0.1 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.1 +0.1 -0.0 +0.1
nutrient D-Cellobiose (C); no added vitamins +0.1 +0.2 +0.0 +0.1 +0.0
motility inner cut, LB soft agar motility assay +0.0 +0.4 -0.2 +0.0 +0.2
motility inner cut, LB soft agar motility assay +0.1 +0.2 +0.1 -0.0 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.4 -0.2 +0.0 +0.1
motility inner cut, LB soft agar motility assay +0.3 +0.2 +0.1 -0.0 +0.1
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