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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_2927 and Ga0059261_2928 are separated by 483 nucleotides
Ga0059261_2928 and Ga0059261_2929 are separated by 30 nucleotides
Ga0059261_2929 and Ga0059261_2930 are separated by 36 nucleotides
Ga0059261_2930 and Ga0059261_2931 are separated by 25 nucleotides
Ga0059261_2927: Ga0059261_2927 - hypothetical protein, at 3,035,592 to 3,035,714
_2927
Ga0059261_2928: Ga0059261_2928 - oxygen-dependent methionine synthase, putative oxygenase component MesX
(from data)
, at 3,036,198 to 3,037,184
_2928
Ga0059261_2929: Ga0059261_2929 - oxygen-dependent methionine synthase, methyltransferase component MesD
(from data)
, at 3,037,215 to 3,038,243
_2929
Ga0059261_2930: Ga0059261_2930 - Predicted Na+-dependent transporter, at 3,038,280 to 3,039,302
_2930
Ga0059261_2931: Ga0059261_2931 - Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family, at 3,039,328 to 3,039,861
_2931
Group
Condition
Ga0059261
_2927
Ga0059261
_2928
Ga0059261
_2929
Ga0059261
_2930
Ga0059261
_2931
nutrient
L-Glutamic (C); no added vitamins
N.D.
-6.8
-5.9
-0.2
-0.2
nutrient
L-Glutamic (C); no added vitamins
N.D.
-6.8
-5.1
-0.2
-0.2
nutrient
D-Cellobiose (C); no added vitamins
N.D.
-6.0
-4.4
-0.4
-0.4
carbon source
NAG (C)
N.D.
-5.5
-4.1
-1.5
-0.2
nutrient
D-Cellobiose (C); no added vitamins
N.D.
-4.7
-5.0
-1.1
-0.2
nitrogen source
L-Histidine (N)
N.D.
-4.2
-4.0
-1.3
-0.6
nutrient
D-Glucose (C); no added vitamins
N.D.
-4.0
-4.3
-1.4
-0.3
carbon source
NAG (C)
N.D.
-4.5
-4.0
-1.3
-0.1
carbon source
L-Glutamic (C)
N.D.
-4.7
-4.0
-0.5
-0.3
nitrogen source
L-Glutamine (N)
N.D.
-3.5
-3.2
-1.8
-1.0
carbon source
D-Glucose (C)
N.D.
-4.5
-4.0
-0.6
-0.1
carbon source
D-Maltose (C)
N.D.
-4.6
-3.5
-0.7
-0.4
carbon source
a-Cyclodextrin (C)
N.D.
-4.7
-3.8
-0.4
-0.1
carbon source
D-Raffinose (C)
N.D.
-4.5
-3.9
-0.5
-0.2
nitrogen source
L-Glutamine (N)
N.D.
-4.3
-3.9
-0.6
-0.5
nitrogen source
L-Proline (N)
N.D.
-4.4
-3.7
-1.1
+0.1
carbon source
D-Raffinose (C)
N.D.
-4.2
-3.9
-0.5
-0.3
carbon source
D-Fructose (C)
N.D.
-4.4
-3.5
-0.7
-0.3
carbon source
D-Xylose (C)
N.D.
-3.4
-3.1
-2.1
-0.4
nitrogen source
L-Alanine (N)
N.D.
-4.4
-3.8
-0.5
+0.0
nitrogen source
L-Glutamic (N)
N.D.
-4.5
-4.0
-0.2
-0.0
carbon source
L-Glutamic (C)
N.D.
-4.8
-3.1
-0.5
-0.3
carbon source
D-Cellobiose (C)
N.D.
-4.4
-4.1
+0.0
-0.1
carbon source
a-Cyclodextrin (C)
N.D.
-3.9
-4.1
-0.1
-0.2
carbon source
D-Cellobiose (C)
N.D.
-4.2
-3.6
-0.2
-0.1
nitrogen source
L-Glutamic (N)
N.D.
-4.1
-3.8
-0.3
-0.1
carbon source
D-Glucose (C)
N.D.
-3.8
-3.3
-0.7
-0.2
nutrient
D-Glucose (C); no added vitamins
N.D.
-4.7
-0.5
-1.5
-0.5
carbon source
D-Maltose (C)
N.D.
-3.5
-2.7
-0.5
-0.0
nitrogen source
L-Proline (N)
N.D.
-3.1
-2.0
-1.3
-0.3
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