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Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_2769 and Ga0059261_2770 are separated by 60 nucleotides
Ga0059261_2770 and Ga0059261_2771 are separated by 1 nucleotides
Ga0059261_2771 and Ga0059261_2772 are separated by 9 nucleotides
Ga0059261_2772 and Ga0059261_2773 are separated by 129 nucleotides
Ga0059261_2769: Ga0059261_2769 - amidohydrolase, at 2,874,705 to 2,876,018
_2769
Ga0059261_2770: Ga0059261_2770 - hypothetical protein, at 2,876,079 to 2,876,693
_2770
Ga0059261_2771: Ga0059261_2771 - 3-hydroxybutyrate dehydrogenase, at 2,876,695 to 2,877,480
_2771
Ga0059261_2772: Ga0059261_2772 - Predicted esterase of the alpha-beta hydrolase superfamily, at 2,877,490 to 2,878,653
_2772
Ga0059261_2773: Ga0059261_2773 - Predicted metalloprotease, at 2,878,783 to 2,879,691
_2773
Group
Condition
Ga0059261
_2769
Ga0059261
_2770
Ga0059261
_2771
Ga0059261
_2772
Ga0059261
_2773
nitrogen source
L-Glutamine (N)
-0.4
-0.6
-1.1
-0.0
-0.1
motility
outer cut, LB soft agar motility assay
-0.2
-0.5
-0.2
-0.3
-0.3
motility
inner cut, LB soft agar motility assay
-0.1
-0.2
-0.8
+0.1
-0.2
nitrogen source
L-Glutamine (N)
-0.3
-0.3
-0.4
+0.0
-0.1
carbon source
L-Glutamine (C)
-0.2
-0.2
-0.3
-0.1
-0.2
stress
Polymyxin B sulfate 0.1 mg/ml
-0.0
-0.3
-0.3
-0.2
-0.1
stress
Fusidic 0.0005 mg/ml
+0.0
-0.4
-0.3
-0.1
-0.1
carbon source
NAG (C)
-0.2
-0.1
-0.4
+0.0
-0.2
carbon source
D-Raffinose (C)
-0.3
-0.0
-0.3
-0.1
-0.2
nitrogen source
L-Histidine (N)
-0.2
-0.2
-0.4
+0.1
-0.2
stress
perchlorate 50 mM
+0.1
-0.3
-0.3
-0.2
-0.0
carbon source
D-Maltose (C)
-0.2
-0.1
-0.2
-0.1
-0.2
carbon source
NAG (C)
-0.2
+0.1
-0.4
-0.0
-0.1
carbon source
a-Cyclodextrin (C)
-0.1
+0.0
-0.4
+0.0
-0.2
carbon source
a-Cyclodextrin (C)
-0.1
-0.1
-0.4
+0.0
-0.1
carbon source
L-Glutamine (C)
-0.1
+0.0
-0.4
-0.1
-0.1
nitrogen source
L-Proline (N)
-0.3
-0.1
-0.3
+0.0
+0.1
nitrogen source
L-Proline (N)
-0.3
+0.0
-0.3
+0.1
-0.0
stress
Chlorite 1.25 mM
-0.0
-0.2
-0.2
-0.2
+0.1
stress
Thallium(I) acetate 0.01 mg/ml
+0.1
-0.2
-0.1
-0.1
-0.1
motility
outer cut, LB soft agar motility assay
-0.2
-0.1
-0.6
+0.7
-0.2
stress
Polymyxin B sulfate 0.05 mg/ml
+0.1
-0.2
-0.0
-0.3
+0.1
motility
inner cut, LB soft agar motility assay
-0.1
-0.3
-0.2
+0.3
+0.1
temperature
LB 20C
-0.2
+0.0
+0.0
+0.2
-0.2
temperature
LB 20C
+0.0
-0.2
+0.2
+0.2
-0.2
nutrient
D-Glucose (C); no added vitamins
-0.4
+0.5
+0.0
+0.2
-0.3
motility
inner cut, LB soft agar motility assay
-0.2
+0.2
+0.1
-0.1
+0.1
nutrient
D-Cellobiose (C); no added vitamins
-0.4
+0.2
+0.2
+0.3
-0.1
nutrient
D-Cellobiose (C); no added vitamins
-0.3
+0.2
+0.4
+0.2
-0.3
nutrient
D-Glucose (C); no added vitamins
-0.3
+0.4
+0.5
+0.2
-0.3
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