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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_2705 and Ga0059261_2706 are separated by 50 nucleotides
Ga0059261_2706 and Ga0059261_2707 are separated by 13 nucleotides
Ga0059261_2707 and Ga0059261_2708 are separated by 167 nucleotides
Ga0059261_2708 and Ga0059261_2709 are separated by 54 nucleotides
Ga0059261_2705: Ga0059261_2705 - putative hydrolase, CocE/NonD family, at 2,818,189 to 2,820,060
_2705
Ga0059261_2706: Ga0059261_2706 - CAAX protease self-immunity, at 2,820,111 to 2,820,818
_2706
Ga0059261_2707: Ga0059261_2707 - fructose-1,6-bisphosphatase, class II, at 2,820,832 to 2,821,800
_2707
Ga0059261_2708: Ga0059261_2708 - hypothetical protein, at 2,821,968 to 2,822,294
_2708
Ga0059261_2709: Ga0059261_2709 - hypothetical protein, at 2,822,349 to 2,822,699
_2709
Group
Condition
Ga0059261
_2705
Ga0059261
_2706
Ga0059261
_2707
Ga0059261
_2708
Ga0059261
_2709
carbon source
L-Glutamic (C)
+0.1
-0.0
-5.6
+0.2
+0.1
nutrient
L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
+0.1
-0.1
-5.6
+0.1
+0.2
nutrient
L-Glutamic (C); no added vitamins
+0.1
+0.1
-5.7
+0.2
+0.3
nutrient
L-Glutamic (C); no added vitamins
+0.2
+0.2
-5.1
-0.2
-0.0
carbon source
L-Glutamic (C)
+0.1
+0.0
-5.3
+0.0
+0.3
nutrient
L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
+0.1
-0.1
-5.1
+0.2
+0.1
motility
inner cut, LB soft agar motility assay
-0.4
+0.1
-3.1
-0.4
-0.9
carbon source
L-Glutamic (C)
-0.0
+0.0
-3.7
+0.0
-0.5
motility
inner cut, LB soft agar motility assay
-0.4
+0.4
-2.8
-1.1
-0.1
carbon source
L-Glutamic (C)
-0.0
+0.1
-3.6
-0.2
-0.0
motility
outer cut, LB soft agar motility assay
-0.0
-0.3
-2.8
-0.9
+0.5
lb
LB
-0.0
+0.1
-3.2
-0.1
-0.2
carbon source
D-Cellobiose (C)
+0.1
-0.1
-3.2
-0.3
-0.0
stress
sodium fluoride 10 mM
-0.0
+0.2
-3.3
+0.0
-0.2
stress
perchlorate 25 mM
-0.0
+0.0
-3.3
+0.1
-0.2
motility
inner cut, LB soft agar motility assay
-0.2
+0.1
-2.9
-0.6
+0.3
motility
inner cut, LB soft agar motility assay
-0.3
+0.3
-3.0
+0.4
-0.6
carbon source
D-Xylose (C)
-0.0
+0.2
-3.0
-0.1
-0.2
stress
Cisplatin 0.01 mg/ml
-0.1
+0.1
-3.1
+0.3
-0.3
stress
Cisplatin 0.025 mg/ml
-0.0
+0.3
-3.2
+0.0
-0.1
stress
Gentamicin 0.015 mg/ml
+0.1
-0.2
-3.1
-0.1
+0.2
carbon source
casaminos (C)
+0.0
+0.2
-3.3
+0.1
+0.0
stress
Choline chloride 10 mM
+0.1
+0.2
-3.1
-0.2
+0.0
stress
Cobalt chloride 0.04 mM
-0.0
+0.0
-3.2
+0.3
+0.2
carbon source
D-Cellobiose (C)
+0.2
+0.1
-2.9
-0.2
+0.2
stress
Chlorite 0.5 mM
+0.0
-0.4
-2.6
+0.5
+0.1
stress
1-ethyl-3-methylimidazolium lysine 2.5 mM
-0.0
+0.1
-2.9
-0.1
+0.5
carbon source
L-Glutamine (C)
+0.0
-0.1
-2.8
+0.5
-0.0
stress
Choline chloride 20 mM
+0.0
+0.4
-3.0
+0.1
+0.3
motility
outer cut, LB soft agar motility assay
-0.4
-0.4
-1.9
-0.3
+0.9
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