Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2518 and Ga0059261_2519 are separated by 188 nucleotidesGa0059261_2519 and Ga0059261_2520 are separated by 49 nucleotidesGa0059261_2520 and Ga0059261_2521 are separated by 22 nucleotidesGa0059261_2521 and Ga0059261_2522 are separated by 376 nucleotides Ga0059261_2518: Ga0059261_2518 - Metal-dependent hydrolase, at 2,609,913 to 2,610,725 _2518 Ga0059261_2519: Ga0059261_2519 - aspartate kinase (EC 2.7.2.4), at 2,610,914 to 2,612,173 _2519 Ga0059261_2520: Ga0059261_2520 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 2,612,223 to 2,612,960 _2520 Ga0059261_2521: Ga0059261_2521 - hypothetical protein, at 2,612,983 to 2,613,543 _2521 Ga0059261_2522: Ga0059261_2522 - export-related chaperone protein CsaA, at 2,613,920 to 2,614,291 _2522
Group Condition Ga0059261_2518 Ga0059261_2519 Ga0059261_2520 Ga0059261_2521 Ga0059261_2522
motility inner cut, LB soft agar motility assay -0.4 N.D. N.D. -0.2 -0.2
motility inner cut, LB soft agar motility assay -0.2 N.D. N.D. -0.1 -0.4
motility outer cut, LB soft agar motility assay -0.4 N.D. N.D. -0.1 -0.0
stress Cholin acetate 20 mM +0.0 N.D. N.D. -0.1 -0.4
stress Cholin acetate 40 mM +0.0 N.D. N.D. +0.0 -0.6
stress Choline chloride 10 mM -0.0 N.D. N.D. +0.0 -0.4
stress acetate 10 mM -0.1 N.D. N.D. +0.1 -0.4
stress 1-ethyl-3-methylimidazolium chloride 5 mM +0.0 N.D. N.D. +0.0 -0.5
stress sodium fluoride 10 mM +0.0 N.D. N.D. -0.1 -0.4
temperature LB 30C -0.0 N.D. N.D. +0.1 -0.5
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.1 N.D. N.D. +0.0 -0.5
stress 1-ethyl-3-methylimidazolium lysine 2.5 mM +0.1 N.D. N.D. -0.1 -0.4
nitrogen source L-Proline (N) -0.2 N.D. N.D. +0.1 -0.3
stress 1-ethyl-3-methylimidazolium lysine 10 mM +0.1 N.D. N.D. -0.0 -0.4
stress 1-ethyl-3-methylimidazolium chloride 20 mM -0.1 N.D. N.D. +0.1 -0.3
stress acetate 20 mM +0.1 N.D. N.D. +0.0 -0.4
stress copper (II) chloride 0.75 mM +0.0 N.D. N.D. -0.1 -0.3
stress Cisplatin 0.01 mg/ml +0.0 N.D. N.D. +0.1 -0.4
stress Nalidixic 0.025 mg/ml +0.1 N.D. N.D. -0.1 -0.3
stress Cephalothin 0.3 mg/ml -0.1 N.D. N.D. +0.1 -0.3
stress Nickel (II) chloride 1.5 mM +0.1 N.D. N.D. +0.0 -0.3
nitrogen source L-Alanine (N) -0.1 N.D. N.D. +0.1 -0.2
motility inner cut, LB soft agar motility assay -0.1 N.D. N.D. +0.4 -0.4
motility inner cut, LB soft agar motility assay +0.3 N.D. N.D. +0.2 -0.6
stress Chlorite 0.5 mM -0.2 N.D. N.D. -0.0 +0.2
nutrient D-Cellobiose (C); no added vitamins -0.2 N.D. N.D. -0.0 +0.3
motility outer cut, LB soft agar motility assay -0.1 N.D. N.D. +0.5 +0.0
stress Sisomicin 0.12 mg/ml +0.0 N.D. N.D. +0.2 +0.2
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 N.D. N.D. +0.1 +0.3
carbon source D-Glucose (C) +0.0 N.D. N.D. +0.1 +0.4
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Ga0059261_2518
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