Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2516 and Ga0059261_2517 are separated by 76 nucleotidesGa0059261_2517 and Ga0059261_2518 are separated by 4 nucleotidesGa0059261_2518 and Ga0059261_2519 are separated by 188 nucleotidesGa0059261_2519 and Ga0059261_2520 are separated by 49 nucleotides Ga0059261_2516: Ga0059261_2516 - Dioxygenases related to 2-nitropropane dioxygenase, at 2,607,965 to 2,608,983 _2516 Ga0059261_2517: Ga0059261_2517 - Predicted metal-dependent hydrolase of the TIM-barrel fold, at 2,609,060 to 2,609,908 _2517 Ga0059261_2518: Ga0059261_2518 - Metal-dependent hydrolase, at 2,609,913 to 2,610,725 _2518 Ga0059261_2519: Ga0059261_2519 - aspartate kinase (EC 2.7.2.4), at 2,610,914 to 2,612,173 _2519 Ga0059261_2520: Ga0059261_2520 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 2,612,223 to 2,612,960 _2520
Group Condition Ga0059261_2516 Ga0059261_2517 Ga0059261_2518 Ga0059261_2519 Ga0059261_2520
motility outer cut, LB soft agar motility assay N.D. -0.4 -0.4 N.D. N.D.
nutrient D-Glucose (C); no added vitamins N.D. -0.2 -0.1 N.D. N.D.
motility inner cut, LB soft agar motility assay N.D. -0.2 -0.1 N.D. N.D.
lb LB N.D. -0.2 -0.1 N.D. N.D.
nutrient D-Cellobiose (C); no added vitamins N.D. -0.1 -0.2 N.D. N.D.
stress Tetracycline 0.001 mg/ml N.D. -0.1 -0.2 N.D. N.D.
stress nitrite 5 mM N.D. -0.2 -0.0 N.D. N.D.
stress nitrite 2.5 mM N.D. -0.1 -0.1 N.D. N.D.
lb LB N.D. -0.1 -0.2 N.D. N.D.
motility inner cut, LB soft agar motility assay N.D. +0.1 -0.2 N.D. N.D.
nitrogen source L-Proline (N) N.D. +0.1 -0.2 N.D. N.D.
stress Chloramphenicol 0.0001 mg/ml N.D. +0.1 -0.2 N.D. N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.2 +0.1 N.D. N.D.
stress Chloramphenicol 0.0025 mg/ml N.D. +0.1 -0.1 N.D. N.D.
nitrogen source L-Glutamine (N) N.D. +0.1 -0.2 N.D. N.D.
motility inner cut, LB soft agar motility assay N.D. +0.3 -0.4 N.D. N.D.
stress Cephalothin 0.3 mg/ml N.D. +0.1 -0.1 N.D. N.D.
stress Cholin acetate 10 mM N.D. -0.1 +0.1 N.D. N.D.
nitrogen source L-Alanine (N) N.D. +0.1 -0.1 N.D. N.D.
carbon source D-Glucose (C) N.D. +0.1 -0.1 N.D. N.D.
nitrogen source L-Proline (N) N.D. +0.2 -0.1 N.D. N.D.
lb LB N.D. +0.2 -0.1 N.D. N.D.
stress methylglyoxal 0.001 vol% N.D. +0.0 +0.2 N.D. N.D.
stress Vanillin 0.25 mM N.D. +0.2 +0.0 N.D. N.D.
stress Phosphomycin 0.005 mg/ml N.D. +0.1 +0.1 N.D. N.D.
nitrogen source L-Glutamic (N) N.D. +0.2 -0.0 N.D. N.D.
stress Nalidixic 0.05 mg/ml N.D. +0.1 +0.2 N.D. N.D.
stress Choline Lysine 5 mM N.D. +0.2 +0.0 N.D. N.D.
stress Nalidixic 0.025 mg/ml N.D. +0.2 +0.1 N.D. N.D.
motility inner cut, LB soft agar motility assay N.D. +0.2 +0.3 N.D. N.D.
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