Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2411 and Ga0059261_2412 are separated by 18 nucleotidesGa0059261_2412 and Ga0059261_2413 are separated by 79 nucleotidesGa0059261_2413 and Ga0059261_2414 are separated by 4 nucleotidesGa0059261_2414 and Ga0059261_2415 are separated by 51 nucleotides Ga0059261_2411: Ga0059261_2411 - Uncharacterized protein conserved in bacteria, at 2,505,488 to 2,506,000 _2411 Ga0059261_2412: Ga0059261_2412 - ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components, at 2,506,019 to 2,507,827 _2412 Ga0059261_2413: Ga0059261_2413 - hypothetical protein, at 2,507,907 to 2,508,137 _2413 Ga0059261_2414: Ga0059261_2414 - hypothetical protein, at 2,508,142 to 2,508,336 _2414 Ga0059261_2415: Ga0059261_2415 - Phytoene/squalene synthetase, at 2,508,388 to 2,509,329 _2415
Group Condition Ga0059261_2411 Ga0059261_2412 Ga0059261_2413 Ga0059261_2414 Ga0059261_2415
temperature LB 20C +0.1 +0.2 -3.4 N.D. -0.4
motility inner cut, LB soft agar motility assay +0.3 +0.3 -3.0 N.D. +0.2
stress Paraquat dichloride 0.035 mg/ml -0.5 -0.5 +0.2 N.D. -0.6
motility inner cut, LB soft agar motility assay +0.3 +0.2 -2.3 N.D. +0.6
motility inner cut, LB soft agar motility assay +0.6 +0.5 -2.9 N.D. +0.8
motility outer cut, LB soft agar motility assay +0.6 +0.6 -2.9 N.D. +0.8
stress nitrite 2.5 mM -0.3 -0.3 +0.4 N.D. -0.6
temperature LB 20C +0.2 +0.3 -0.5 N.D. -0.6
motility outer cut, LB soft agar motility assay +0.2 +0.6 -1.6 N.D. +0.4
nutrient L-Glutamic (C); no added vitamins +0.0 -0.1 +1.0 N.D. -0.5
nitrogen source L-Proline (N) +0.3 +0.4 -0.8 N.D. +1.0
nitrogen source L-Proline (N) +0.3 +0.5 -0.5 N.D. +0.8
temperature LB 37C +0.5 +0.4 -0.1 N.D. +0.9
stress Lomefloxacin 0.02 mM +0.4 +0.5 +0.2 N.D. +0.6
nitrogen source L-Histidine (N) +0.3 +0.5 +0.9 N.D. +0.1
nutrient D-Glucose (C); no added vitamins +0.1 +0.1 -0.2 N.D. +1.7
carbon source D-Glucose (C) +0.2 +0.1 +1.0 N.D. +0.5
carbon source D-Cellobiose (C) +0.1 +0.1 +1.0 N.D. +0.8
stress A22 0.02 mg/ml +0.4 +0.4 +0.7 N.D. +0.5
carbon source NAG (C) +0.0 +0.3 +0.4 N.D. +1.3
carbon source NAG (C) +0.0 +0.2 +0.8 N.D. +1.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.2 +0.6 N.D. +1.3
nitrogen source L-Glutamic (N) +0.4 +0.4 +1.0 N.D. +0.7
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.1 +0.8 N.D. +1.6
nitrogen source L-Glutamine (N) +0.5 +0.4 +0.5 N.D. +1.2
nutrient D-Cellobiose (C); no added vitamins +0.3 +0.2 +1.1 N.D. +1.4
nitrogen source L-Glutamine (N) +0.4 +0.2 +0.5 N.D. +1.8
nutrient D-Glucose (C); no added vitamins +0.2 +0.3 +0.9 N.D. +1.8
nutrient D-Cellobiose (C); no added vitamins +0.1 +0.4 +1.3 N.D. +1.4
nitrogen source L-Alanine (N) +0.5 +0.9 +0.7 N.D. +1.6
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