Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2381 and Ga0059261_2382 are separated by 104 nucleotidesGa0059261_2382 and Ga0059261_2383 are separated by 129 nucleotidesGa0059261_2383 and Ga0059261_2384 are separated by 44 nucleotidesGa0059261_2384 and Ga0059261_2385 are separated by 158 nucleotides Ga0059261_2381: Ga0059261_2381 - Phage head completion protein (GPL), at 2,477,659 to 2,478,159 _2381 Ga0059261_2382: Ga0059261_2382 - Phage small terminase subunit, at 2,478,264 to 2,479,013 _2382 Ga0059261_2383: Ga0059261_2383 - phage major capsid protein, P2 family, at 2,479,143 to 2,480,270 _2383 Ga0059261_2384: Ga0059261_2384 - Phage capsid scaffolding protein (GPO) serine peptidase, at 2,480,315 to 2,481,154 _2384 Ga0059261_2385: Ga0059261_2385 - Uncharacterized conserved protein, at 2,481,313 to 2,483,220 _2385
Group Condition Ga0059261_2381 Ga0059261_2382 Ga0059261_2383 Ga0059261_2384 Ga0059261_2385
stress nitrite 2.5 mM -0.5 -0.1 -0.0 -0.2 -0.2
carbon source NAG (C) -0.2 -0.2 -0.0 -0.2 -0.0
stress Benzalkonium Chloride 0.0005 mg/ml -0.3 +0.1 -0.0 -0.1 -0.1
carbon source NAG (C) +0.2 -0.1 -0.2 +0.0 +0.0
stress nitrite 10 mM +0.3 -0.1 -0.1 -0.1 -0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.1 -0.1 -0.1 +0.2 +0.0
stress nitrate 100 mM +0.3 -0.1 -0.0 -0.1 +0.0
nitrogen source L-Histidine (N) -0.1 +0.2 +0.1 -0.0 +0.1
motility inner cut, LB soft agar motility assay -0.0 +0.2 +0.0 -0.2 +0.3
motility inner cut, LB soft agar motility assay +0.1 -0.0 -0.0 +0.3 +0.1
nutrient D-Glucose (C); no added vitamins -0.1 +0.1 +0.1 +0.2 +0.2
nitrogen source L-Glutamic (N) +0.1 +0.2 +0.1 +0.0 +0.2
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.2 +0.1 -0.0 +0.2 +0.1
lb LB +0.1 +0.1 +0.2 +0.0 +0.2
nitrogen source L-Alanine (N) +0.1 +0.0 +0.1 +0.2 +0.2
temperature LB 37C +0.1 +0.2 +0.1 +0.1 +0.1
nitrogen source L-Proline (N) -0.0 +0.2 +0.1 +0.1 +0.3
stress A22 0.01 mg/ml -0.0 +0.2 +0.2 +0.2 +0.1
temperature LB 20C +0.2 +0.2 +0.1 +0.2 +0.1
lb LB +0.0 +0.3 +0.1 +0.2 +0.2
stress A22 0.02 mg/ml +0.3 +0.2 +0.1 +0.0 +0.1
stress D-Cycloserine 0.064 mg/ml +0.0 +0.2 +0.1 +0.3 +0.2
stress Cephalothin 0.3 mg/ml +0.1 +0.2 +0.1 +0.1 +0.2
motility outer cut, LB soft agar motility assay +0.0 +0.2 +0.2 +0.2 +0.3
stress Lomefloxacin 0.01 mM +0.1 +0.2 +0.2 +0.2 +0.3
stress Nalidixic 0.05 mg/ml +0.5 +0.2 +0.1 +0.2 +0.1
motility inner cut, LB soft agar motility assay +0.6 +0.4 -0.1 +0.4 +0.2
stress Lomefloxacin 0.02 mM +0.4 +0.3 +0.4 +0.3 +0.4
motility outer cut, LB soft agar motility assay +0.6 +0.3 +0.0 +0.7 +0.1
motility inner cut, LB soft agar motility assay +0.4 +0.4 +0.2 +0.6 +0.4
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