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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_2303 and Ga0059261_2304 are separated by 114 nucleotides
Ga0059261_2304 and Ga0059261_2305 are separated by 199 nucleotides
Ga0059261_2305 and Ga0059261_2306 are separated by 72 nucleotides
Ga0059261_2306 and Ga0059261_2307 are separated by 11 nucleotides
Ga0059261_2303: Ga0059261_2303 - methionine biosynthesis protein MetW, at 2,405,330 to 2,405,920
_2303
Ga0059261_2304: Ga0059261_2304 - Imidazolonepropionase and related amidohydrolases, at 2,406,035 to 2,409,232
_2304
Ga0059261_2305: Ga0059261_2305 - hypothetical protein, at 2,409,432 to 2,412,371
_2305
Ga0059261_2306: Ga0059261_2306 - hypothetical protein, at 2,412,444 to 2,413,118
_2306
Ga0059261_2307: Ga0059261_2307 - Glycosyl hydrolases family 43/F5/8 type C domain, at 2,413,130 to 2,414,947
_2307
Group
Condition
Ga0059261
_2303
Ga0059261
_2304
Ga0059261
_2305
Ga0059261
_2306
Ga0059261
_2307
carbon source
L-Glutamic (C)
-7.0
+0.0
+0.0
+0.0
+0.1
carbon source
D-Cellobiose (C)
-6.3
-0.0
-0.0
+0.1
+0.0
nutrient
L-Glutamic (C); no added vitamins
-6.4
+0.0
+0.0
+0.0
+0.1
carbon source
L-Glutamic (C)
-5.9
+0.0
+0.0
+0.0
-0.0
carbon source
D-Cellobiose (C)
-5.8
+0.0
+0.0
-0.1
+0.1
nutrient
L-Glutamic (C); no added vitamins
-5.6
+0.0
+0.0
-0.0
+0.0
carbon source
D-Raffinose (C)
-5.3
-0.0
+0.0
+0.0
-0.0
carbon source
NAG (C)
-5.2
-0.1
-0.0
+0.0
-0.0
carbon source
a-Cyclodextrin (C)
-5.3
-0.0
+0.0
+0.1
+0.0
carbon source
a-Cyclodextrin (C)
-5.1
-0.0
+0.0
+0.0
-0.0
carbon source
L-Glutamic (C)
-5.1
-0.0
+0.0
-0.0
+0.0
carbon source
NAG (C)
-5.1
-0.0
-0.0
+0.1
-0.0
carbon source
NAG (C)
-5.0
+0.0
-0.0
+0.0
-0.0
carbon source
D-Cellobiose (C)
-5.0
+0.0
-0.0
+0.0
+0.0
carbon source
D-Cellobiose (C)
-5.0
+0.0
+0.1
+0.1
+0.0
carbon source
D-Raffinose (C)
-4.9
-0.0
+0.0
+0.1
-0.0
nutrient
D-Cellobiose (C); no added vitamins
-4.9
+0.0
+0.1
+0.1
-0.0
carbon source
NAG (C)
-4.7
-0.0
+0.0
+0.1
-0.0
carbon source
D-Glucose (C)
-4.7
+0.0
+0.1
-0.0
-0.0
carbon source
D-Fructose (C)
-4.8
+0.1
+0.0
+0.1
+0.0
carbon source
L-Glutamic (C)
-4.6
-0.0
+0.0
+0.0
-0.0
nitrogen source
L-Glutamic (N)
-4.8
+0.0
+0.1
+0.1
+0.1
nitrogen source
L-Alanine (N)
-4.9
+0.0
+0.1
+0.1
+0.1
carbon source
D-Maltose (C)
-4.6
-0.0
+0.0
+0.1
+0.0
nutrient
D-Cellobiose (C); no added vitamins
-4.9
-0.0
+0.1
+0.3
+0.0
nitrogen source
L-Histidine (N)
-4.7
+0.0
+0.1
-0.0
+0.1
carbon source
D-Glucose (C)
-4.6
+0.0
+0.1
+0.1
-0.0
nitrogen source
L-Glutamic (N)
-4.7
+0.1
+0.1
+0.1
+0.1
carbon source
D-Glucose (C)
-4.4
+0.0
+0.1
+0.1
-0.0
carbon source
D-Glucose (C)
-4.3
+0.0
+0.0
+0.1
-0.0
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