Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2240 and Ga0059261_2241 overlap by 4 nucleotidesGa0059261_2241 and Ga0059261_2242 are separated by 40 nucleotidesGa0059261_2242 and Ga0059261_2243 are separated by 89 nucleotidesGa0059261_2243 and Ga0059261_2244 are separated by 97 nucleotides Ga0059261_2240: Ga0059261_2240 - ribulose-phosphate 3-epimerase, at 2,340,367 to 2,341,026 _2240 Ga0059261_2241: Ga0059261_2241 - Uncharacterized protein conserved in bacteria, at 2,341,023 to 2,342,771 _2241 Ga0059261_2242: Ga0059261_2242 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 2,342,812 to 2,344,383 _2242 Ga0059261_2243: Ga0059261_2243 - Membrane protein involved in the export of O-antigen and teichoic acid, at 2,344,473 to 2,345,990 _2243 Ga0059261_2244: Ga0059261_2244 - DNA polymerase I (EC 2.7.7.7), at 2,346,088 to 2,348,853 _2244
Group Condition Ga0059261_2240 Ga0059261_2241 Ga0059261_2242 Ga0059261_2243 Ga0059261_2244
nitrogen source L-Glutamine (N) N.D. +0.2 N.D. -3.1 -1.9
nitrogen source L-Histidine (N) N.D. +0.1 N.D. -3.0 -1.9
nitrogen source L-Glutamine (N) N.D. +0.6 N.D. -2.1 -2.8
nutrient L-Glutamic (C); no added vitamins N.D. +0.3 N.D. -4.2 -0.2
carbon source L-Glutamine (C) N.D. +0.3 N.D. -3.0 -1.2
motility inner cut, LB soft agar motility assay N.D. -0.6 N.D. -2.2 -1.0
carbon source L-Glutamic (C) N.D. +0.2 N.D. -3.7 -0.3
stress Phosphomycin 0.005 mg/ml N.D. -0.0 N.D. -2.2 -1.5
motility inner cut, LB soft agar motility assay N.D. -0.5 N.D. -1.9 -1.2
motility inner cut, LB soft agar motility assay N.D. -0.7 N.D. -1.5 -1.4
pH LB, pH8 N.D. -0.6 N.D. -1.8 -0.9
temperature LB 20C N.D. -1.0 N.D. -1.0 -1.3
temperature LB 20C N.D. -0.1 N.D. -1.7 -1.4
nutrient L-Glutamic (C); no added vitamins N.D. +0.1 N.D. -2.9 -0.3
motility outer cut, LB soft agar motility assay N.D. -0.9 N.D. -1.1 -1.1
motility outer cut, LB soft agar motility assay N.D. -0.5 N.D. -1.2 -1.4
carbon source D-Xylose (C) N.D. +0.2 N.D. -3.1 -0.1
carbon source a-Cyclodextrin (C) N.D. -0.0 N.D. -3.1 +0.3
carbon source L-Glutamic (C) N.D. +0.1 N.D. -2.6 -0.3
nitrogen source L-Glutamic (N) N.D. -0.3 N.D. -2.4 +0.1
carbon source a-Cyclodextrin (C) N.D. +0.1 N.D. -2.9 +0.3
carbon source L-Glutamic (C) N.D. +0.2 N.D. -2.6 -0.1
carbon source D-Xylose (C) N.D. +0.4 N.D. -2.6 -0.2
motility inner cut, LB soft agar motility assay N.D. +0.2 N.D. -1.2 -1.3
pH LB, pH8 N.D. +0.0 N.D. -1.7 -0.6
carbon source L-Glutamine (C) N.D. +0.6 N.D. -1.4 -1.2
carbon source D-Raffinose (C) N.D. +0.4 N.D. -1.9 +0.2
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins N.D. +0.2 N.D. -1.9 +0.5
nutrient D-Glucose (C); no added vitamins N.D. -0.7 N.D. +0.9 +0.9
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.4 N.D. +2.6 +0.3
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