Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2159 and Ga0059261_2160 are separated by 65 nucleotidesGa0059261_2160 and Ga0059261_2161 are separated by 124 nucleotidesGa0059261_2161 and Ga0059261_2162 overlap by 4 nucleotidesGa0059261_2162 and Ga0059261_2163 are separated by 24 nucleotides Ga0059261_2159: Ga0059261_2159 - Enoyl-CoA hydratase/carnithine racemase, at 2,271,134 to 2,271,919 _2159 Ga0059261_2160: Ga0059261_2160 - acetyl-CoA acetyltransferases, at 2,271,985 to 2,273,181 _2160 Ga0059261_2161: Ga0059261_2161 - hydroxymethylbilane synthase (EC 2.5.1.61), at 2,273,306 to 2,274,214 _2161 Ga0059261_2162: Ga0059261_2162 - Uroporphyrinogen-III synthase, at 2,274,211 to 2,274,879 _2162 Ga0059261_2163: Ga0059261_2163 - hypothetical protein, at 2,274,904 to 2,275,797 _2163
Group Condition Ga0059261_2159 Ga0059261_2160 Ga0059261_2161 Ga0059261_2162 Ga0059261_2163
stress Vanillin 0.25 mM -0.4 +0.0 N.D. N.D. N.D.
stress Carbenicillin 0.03 mg/ml -0.4 -0.0 N.D. N.D. N.D.
motility inner cut, LB soft agar motility assay -0.3 -0.0 N.D. N.D. N.D.
stress Rifampicin 0.001 mg/ml -0.3 -0.0 N.D. N.D. N.D.
carbon source L-Glutamine (C) -0.1 -0.1 N.D. N.D. N.D.
stress acetate 10 mM -0.2 +0.0 N.D. N.D. N.D.
carbon source D-Glucose (C) -0.2 +0.0 N.D. N.D. N.D.
stress Nalidixic 0.05 mg/ml -0.2 +0.0 N.D. N.D. N.D.
lb LB -0.2 +0.0 N.D. N.D. N.D.
carbon source NAG (C) +0.1 -0.1 N.D. N.D. N.D.
motility inner cut, LB soft agar motility assay -0.2 +0.2 N.D. N.D. N.D.
motility inner cut, LB soft agar motility assay -0.2 +0.2 N.D. N.D. N.D.
stress Lomefloxacin 0.01 mM +0.1 -0.1 N.D. N.D. N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 -0.1 N.D. N.D. N.D.
stress Cisplatin 0.01 mg/ml +0.2 -0.1 N.D. N.D. N.D.
stress benzoic 0.145 mg/ml +0.2 -0.0 N.D. N.D. N.D.
carbon source D-Maltose (C) +0.2 -0.0 N.D. N.D. N.D.
nutrient D-Cellobiose (C); no added vitamins +0.2 -0.1 N.D. N.D. N.D.
pH LB, pH7 +0.2 -0.0 N.D. N.D. N.D.
temperature LB 30C +0.2 +0.0 N.D. N.D. N.D.
pH LB, pH7 +0.2 +0.0 N.D. N.D. N.D.
carbon source NAG (C) +0.2 +0.1 N.D. N.D. N.D.
temperature LB 20C +0.3 -0.0 N.D. N.D. N.D.
nutrient L-Glutamic (C); no added vitamins +0.2 +0.1 N.D. N.D. N.D.
carbon source NAG (C) +0.2 +0.2 N.D. N.D. N.D.
temperature LB 20C +0.4 -0.0 N.D. N.D. N.D.
motility inner cut, LB soft agar motility assay +0.4 +0.0 N.D. N.D. N.D.
nitrogen source L-Glutamine (N) +0.5 -0.0 N.D. N.D. N.D.
motility outer cut, LB soft agar motility assay +1.1 -0.0 N.D. N.D. N.D.
motility outer cut, LB soft agar motility assay +0.9 +0.3 N.D. N.D. N.D.
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