Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2122 and Ga0059261_2123 are separated by 213 nucleotidesGa0059261_2123 and Ga0059261_2124 are separated by 39 nucleotidesGa0059261_2124 and Ga0059261_2125 are separated by 90 nucleotidesGa0059261_2125 and Ga0059261_2126 are separated by 11 nucleotides Ga0059261_2122: Ga0059261_2122 - chorismate mutase (EC 5.4.99.5), at 2,236,967 to 2,237,260 _2122 Ga0059261_2123: Ga0059261_2123 - Geranylgeranyl pyrophosphate synthase, at 2,237,474 to 2,238,487 _2123 Ga0059261_2124: Ga0059261_2124 - hypothetical protein, at 2,238,527 to 2,238,739 _2124 Ga0059261_2125: Ga0059261_2125 - ATP-dependent helicase HrpB, at 2,238,830 to 2,241,286 _2125 Ga0059261_2126: Ga0059261_2126 - ETC complex I subunit conserved region, at 2,241,298 to 2,241,579 _2126
Group Condition Ga0059261_2122 Ga0059261_2123 Ga0059261_2124 Ga0059261_2125 Ga0059261_2126
stress syringaldehyde 0.5 mM N.D. N.D. -0.5 -0.3 -0.9
stress nitrite 10 mM N.D. N.D. -0.7 -0.3 -0.4
stress nitrite 2.5 mM N.D. N.D. -0.5 -0.5 -0.4
stress methylglyoxal 0.001 vol% N.D. N.D. -0.4 -0.5 -0.3
carbon source L-Glutamic (C) N.D. N.D. -0.5 -0.7 -0.1
carbon source NAG (C) N.D. N.D. -0.7 -0.3 -0.1
stress Benzalkonium Chloride 0.0005 mg/ml N.D. N.D. -0.3 -0.7 +0.3
stress Fusidic 0.0005 mg/ml N.D. N.D. +0.3 +0.4 +0.4
temperature LB 30C N.D. N.D. +0.6 +0.6 +0.2
temperature LB 20C N.D. N.D. +0.7 +0.4 +0.2
nitrogen source L-Glutamine (N) N.D. N.D. +0.2 +0.5 +0.6
stress A22 0.01 mg/ml N.D. N.D. +0.4 +0.6 +0.4
nitrogen source L-Proline (N) N.D. N.D. +0.3 +0.7 +0.4
motility inner cut, LB soft agar motility assay N.D. N.D. +1.1 +0.6 -0.3
motility inner cut, LB soft agar motility assay N.D. N.D. +0.4 +0.2 +0.9
stress Dimethyl Sulfoxide 5 vol% N.D. N.D. +0.5 +0.5 +0.5
temperature LB 20C N.D. N.D. +0.6 +0.5 +0.5
stress Cephalothin 0.3 mg/ml N.D. N.D. +0.8 +0.6 +0.2
nitrogen source L-Alanine (N) N.D. N.D. +0.5 +0.6 +0.5
lb LB N.D. N.D. +0.6 +0.5 +0.6
nitrogen source L-Glutamic (N) N.D. N.D. +0.7 +0.7 +0.5
stress A22 0.02 mg/ml N.D. N.D. +0.7 +0.6 +0.5
stress Doxycycline hyclate 0.0001 mg/ml N.D. N.D. +0.7 +0.8 +0.4
lb LB N.D. N.D. +0.9 +0.8 +0.4
motility inner cut, LB soft agar motility assay N.D. N.D. +0.6 +1.1 +0.4
stress Lomefloxacin 0.01 mM N.D. N.D. +0.9 +0.7 +0.6
stress D-Cycloserine 0.064 mg/ml N.D. N.D. +0.9 +0.8 +0.7
motility outer cut, LB soft agar motility assay N.D. N.D. +0.7 +1.2 +0.7
motility outer cut, LB soft agar motility assay N.D. N.D. +1.3 +1.0 +1.0
motility inner cut, LB soft agar motility assay N.D. N.D. +1.0 +1.4 +1.0
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