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Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_2122 and Ga0059261_2123 are separated by 213 nucleotides
Ga0059261_2123 and Ga0059261_2124 are separated by 39 nucleotides
Ga0059261_2124 and Ga0059261_2125 are separated by 90 nucleotides
Ga0059261_2125 and Ga0059261_2126 are separated by 11 nucleotides
Ga0059261_2122: Ga0059261_2122 - chorismate mutase (EC 5.4.99.5), at 2,236,967 to 2,237,260
_2122
Ga0059261_2123: Ga0059261_2123 - Geranylgeranyl pyrophosphate synthase, at 2,237,474 to 2,238,487
_2123
Ga0059261_2124: Ga0059261_2124 - hypothetical protein, at 2,238,527 to 2,238,739
_2124
Ga0059261_2125: Ga0059261_2125 - ATP-dependent helicase HrpB, at 2,238,830 to 2,241,286
_2125
Ga0059261_2126: Ga0059261_2126 - ETC complex I subunit conserved region, at 2,241,298 to 2,241,579
_2126
Group
Condition
Ga0059261
_2122
Ga0059261
_2123
Ga0059261
_2124
Ga0059261
_2125
Ga0059261
_2126
stress
syringaldehyde 0.5 mM
N.D.
N.D.
-0.5
-0.3
-0.9
stress
nitrite 10 mM
N.D.
N.D.
-0.7
-0.3
-0.4
stress
nitrite 2.5 mM
N.D.
N.D.
-0.5
-0.5
-0.4
stress
methylglyoxal 0.001 vol%
N.D.
N.D.
-0.4
-0.5
-0.3
carbon source
L-Glutamic (C)
N.D.
N.D.
-0.5
-0.7
-0.1
carbon source
NAG (C)
N.D.
N.D.
-0.7
-0.3
-0.1
stress
Benzalkonium Chloride 0.0005 mg/ml
N.D.
N.D.
-0.3
-0.7
+0.3
stress
Fusidic 0.0005 mg/ml
N.D.
N.D.
+0.3
+0.4
+0.4
temperature
LB 30C
N.D.
N.D.
+0.6
+0.6
+0.2
temperature
LB 20C
N.D.
N.D.
+0.7
+0.4
+0.2
nitrogen source
L-Glutamine (N)
N.D.
N.D.
+0.2
+0.5
+0.6
stress
A22 0.01 mg/ml
N.D.
N.D.
+0.4
+0.6
+0.4
nitrogen source
L-Proline (N)
N.D.
N.D.
+0.3
+0.7
+0.4
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
+1.1
+0.6
-0.3
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
+0.4
+0.2
+0.9
stress
Dimethyl Sulfoxide 5 vol%
N.D.
N.D.
+0.5
+0.5
+0.5
temperature
LB 20C
N.D.
N.D.
+0.6
+0.5
+0.5
stress
Cephalothin 0.3 mg/ml
N.D.
N.D.
+0.8
+0.6
+0.2
nitrogen source
L-Alanine (N)
N.D.
N.D.
+0.5
+0.6
+0.5
lb
LB
N.D.
N.D.
+0.6
+0.5
+0.6
nitrogen source
L-Glutamic (N)
N.D.
N.D.
+0.7
+0.7
+0.5
stress
A22 0.02 mg/ml
N.D.
N.D.
+0.7
+0.6
+0.5
stress
Doxycycline hyclate 0.0001 mg/ml
N.D.
N.D.
+0.7
+0.8
+0.4
lb
LB
N.D.
N.D.
+0.9
+0.8
+0.4
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
+0.6
+1.1
+0.4
stress
Lomefloxacin 0.01 mM
N.D.
N.D.
+0.9
+0.7
+0.6
stress
D-Cycloserine 0.064 mg/ml
N.D.
N.D.
+0.9
+0.8
+0.7
motility
outer cut, LB soft agar motility assay
N.D.
N.D.
+0.7
+1.2
+0.7
motility
outer cut, LB soft agar motility assay
N.D.
N.D.
+1.3
+1.0
+1.0
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
+1.0
+1.4
+1.0
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