Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2068 and Ga0059261_2069 are separated by 14 nucleotidesGa0059261_2069 and Ga0059261_2070 are separated by 9 nucleotidesGa0059261_2070 and Ga0059261_2071 overlap by 8 nucleotidesGa0059261_2071 and Ga0059261_2072 overlap by 4 nucleotides Ga0059261_2068: Ga0059261_2068 - hypothetical protein, at 2,168,137 to 2,168,562 _2068 Ga0059261_2069: Ga0059261_2069 - ATPase, FliI/YscN family, at 2,168,577 to 2,169,905 _2069 Ga0059261_2070: Ga0059261_2070 - Flagellar assembly protein FliH, at 2,169,915 to 2,170,634 _2070 Ga0059261_2071: Ga0059261_2071 - flagellar motor switch protein FliG, at 2,170,627 to 2,171,637 _2071 Ga0059261_2072: Ga0059261_2072 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 2,171,634 to 2,173,301 _2072
Group Condition Ga0059261_2068 Ga0059261_2069 Ga0059261_2070 Ga0059261_2071 Ga0059261_2072
motility outer cut, LB soft agar motility assay -2.1 -1.6 -2.0 -1.5 -1.1
motility outer cut, LB soft agar motility assay -1.6 -1.1 -1.7 -3.1 -0.6
motility inner cut, LB soft agar motility assay +0.1 -0.2 -0.2 -1.5 -0.2
stress nitrite 2.5 mM -0.2 -0.3 -0.3 -0.4 -0.1
stress Sisomicin 0.12 mg/ml -0.4 -0.1 -0.2 -0.2 +0.2
carbon source D-Maltose (C) +0.5 -0.2 -0.4 -0.3 +0.1
motility inner cut, LB soft agar motility assay -0.2 -0.2 +0.3 -0.3 +0.1
carbon source L-Glutamine (C) +0.2 -0.2 -0.3 +0.4 +0.2
carbon source L-Glutamic (C) +0.2 -0.1 +0.3 +0.4 +0.2
nitrogen source L-Glutamine (N) +0.5 +0.2 +0.2 -0.1 +0.3
nitrogen source L-Histidine (N) +0.4 +0.1 +0.2 +0.1 +0.3
nutrient D-Cellobiose (C); no added vitamins +0.2 +0.4 +0.2 -0.1 +0.5
stress D-Cycloserine 0.064 mg/ml +0.4 +0.3 +0.2 +0.0 +0.2
carbon source L-Glutamic (C) +0.3 +0.2 +0.1 +0.4 +0.1
carbon source D-Cellobiose (C) +0.5 +0.0 -0.1 +0.5 +0.2
nitrogen source L-Alanine (N) +0.4 +0.2 +0.3 +0.1 +0.2
carbon source D-Glucose (C) +0.2 +0.2 +0.1 +0.5 +0.2
nutrient D-Glucose (C); no added vitamins -0.1 +0.4 +0.2 +0.5 +0.2
carbon source D-Cellobiose (C) +0.1 +0.3 +0.0 +0.3 +0.5
carbon source D-Glucose (C) +0.1 +0.2 +0.5 +0.0 +0.4
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.3 +0.2 +0.1 +0.4 +0.3
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.3 +0.2 +0.6 +0.3
nitrogen source L-Glutamic (N) +0.4 +0.2 +0.4 +0.2 +0.2
stress Doxycycline hyclate 0.0001 mg/ml +0.6 +0.2 +0.4 -0.0 +0.4
nitrogen source L-Glutamic (N) +0.4 +0.3 +0.2 +0.3 +0.4
motility inner cut, LB soft agar motility assay +0.8 +0.5 +0.3 +0.0 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.4 +0.3 +0.2 +0.6 +0.3
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.5 +0.3 +0.2 +0.7 +0.1
nutrient D-Glucose (C); no added vitamins -0.2 +0.4 +0.5 +0.7 +0.4
carbon source L-Glutamic (C) +0.3 +0.4 +0.2 +0.8 +0.3
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Ga0059261_2068
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Ga0059261_2069
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Ga0059261_2072
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