Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_2049 and Ga0059261_2050 are separated by 3 nucleotides
Ga0059261_2050 and Ga0059261_2051 are separated by 19 nucleotides
Ga0059261_2051 and Ga0059261_2052 overlap by 4 nucleotides
Ga0059261_2052 and Ga0059261_2053 overlap by 4 nucleotides
Ga0059261_2049: Ga0059261_2049 - argininosuccinate lyase, at 2,152,846 to 2,154,216
_2049
Ga0059261_2050: Ga0059261_2050 - hypothetical protein, at 2,154,220 to 2,154,453
_2050
Ga0059261_2051: Ga0059261_2051 - diaminopimelate decarboxylase (EC 4.1.1.20)
(from data)
, at 2,154,473 to 2,155,732
_2051
Ga0059261_2052: Ga0059261_2052 - siroheme synthase, N-terminal domain, at 2,155,729 to 2,156,484
_2052
Ga0059261_2053: Ga0059261_2053 - Mg2+ and Co2+ transporters, at 2,156,481 to 2,157,431
_2053
Group
Condition
Ga0059261
_2049
Ga0059261
_2050
Ga0059261
_2051
Ga0059261
_2052
Ga0059261
_2053
carbon source
L-Glutamic (C)
-4.5
-1.7
-6.5
-8.2
-0.4
nutrient
L-Glutamic (C); no added vitamins
-5.3
-0.5
-6.6
-7.0
+0.1
carbon source
D-Cellobiose (C)
-4.8
-1.6
-6.5
-6.1
-0.1
carbon source
a-Cyclodextrin (C)
-4.6
-3.7
-5.6
-5.2
+0.0
carbon source
a-Cyclodextrin (C)
-4.3
-2.4
-6.0
-5.9
+0.1
carbon source
D-Cellobiose (C)
-4.2
-1.7
-6.3
-5.8
+0.0
carbon source
L-Glutamic (C)
-4.9
-1.5
-5.4
-6.2
+0.2
nutrient
L-Glutamic (C); no added vitamins
-5.3
-0.6
-6.1
-5.8
+0.0
carbon source
L-Glutamic (C)
-4.8
-1.4
-5.5
-5.6
+0.0
carbon source
L-Glutamic (C)
-4.9
-1.5
-6.1
-4.4
+0.0
carbon source
D-Cellobiose (C)
-5.0
-1.3
-5.7
-5.1
+0.2
carbon source
D-Cellobiose (C)
-4.5
-1.7
-5.5
-5.4
+0.3
carbon source
D-Fructose (C)
-4.1
-1.8
-5.2
-5.5
+0.2
carbon source
D-Maltose (C)
-4.5
-1.1
-5.0
-5.7
-0.0
carbon source
D-Raffinose (C)
-4.4
-1.1
-5.5
-5.4
+0.0
carbon source
NAG (C)
-4.5
-0.3
-5.5
-5.6
+0.0
carbon source
NAG (C)
-4.7
-0.8
-5.0
-5.3
+0.1
carbon source
D-Glucose (C)
-4.3
-1.3
-4.8
-5.3
+0.1
carbon source
D-Glucose (C)
-4.2
-0.9
-5.4
-4.9
+0.1
carbon source
D-Glucose (C)
-3.7
-1.2
-5.2
-5.2
+0.0
carbon source
NAG (C)
-4.1
-0.7
-5.0
-5.2
-0.1
carbon source
D-Glucose (C)
-5.4
-1.3
-5.0
-3.5
+0.3
carbon source
NAG (C)
-3.8
-0.5
-5.6
-4.8
-0.2
carbon source
D-Raffinose (C)
-3.9
-0.3
-5.4
-5.0
+0.0
nutrient
D-Cellobiose (C); no added vitamins
-4.4
-0.3
-4.1
-5.3
-0.2
carbon source
D-Maltose (C)
-4.1
-0.6
-4.3
-5.0
+0.2
nitrogen source
L-Glutamic (N)
-3.9
-0.2
-4.8
-4.4
+0.2
nitrogen source
L-Glutamine (N)
-4.3
+0.6
-4.7
-4.6
+0.1
nitrogen source
L-Alanine (N)
-3.4
-0.5
-4.7
-4.5
+0.2
nitrogen source
L-Glutamine (N)
-3.7
+2.1
-4.7
-3.2
-0.0
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