Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2029 and Ga0059261_2030 are separated by 122 nucleotidesGa0059261_2030 and Ga0059261_2031 are separated by 68 nucleotidesGa0059261_2031 and Ga0059261_2032 are separated by 262 nucleotidesGa0059261_2032 and Ga0059261_2033 are separated by 212 nucleotides Ga0059261_2029: Ga0059261_2029 - diguanylate cyclase (GGDEF) domain, at 2,131,771 to 2,132,796 _2029 Ga0059261_2030: Ga0059261_2030 - Peroxiredoxin, at 2,132,919 to 2,133,461 _2030 Ga0059261_2031: Ga0059261_2031 - Phospholipase A1, at 2,133,530 to 2,134,636 _2031 Ga0059261_2032: Ga0059261_2032 - Heat shock protein, at 2,134,899 to 2,135,618 _2032 Ga0059261_2033: Ga0059261_2033 - tRNA, at 2,135,831 to 2,135,920 _2033
Group Condition Ga0059261_2029 Ga0059261_2030 Ga0059261_2031 Ga0059261_2032 Ga0059261_2033
motility inner cut, LB soft agar motility assay -0.3 -0.5 +0.2 -0.3 N.D.
motility inner cut, LB soft agar motility assay -0.7 +0.4 -0.4 +0.0 N.D.
temperature LB 20C -0.3 -0.1 -0.2 +0.2 N.D.
pH LB, pH8 -0.3 -0.2 +0.0 -0.1 N.D.
motility inner cut, LB soft agar motility assay -0.2 +0.0 +0.0 -0.2 N.D.
lb LB -0.2 +0.1 -0.1 -0.1 N.D.
nitrogen source L-Glutamine (N) -0.3 -0.3 +0.2 -0.0 N.D.
nitrogen source L-Proline (N) -0.1 -0.4 +0.2 +0.1 N.D.
stress nitrite 2.5 mM +0.2 -0.1 +0.0 -0.2 N.D.
stress Cholin acetate 40 mM -0.1 -0.1 +0.0 +0.2 N.D.
motility inner cut, LB soft agar motility assay -0.4 -0.0 -0.1 +0.6 N.D.
carbon source casaminos (C) -0.2 -0.1 +0.1 +0.2 N.D.
stress Tetracycline 0.002 mg/ml -0.1 -0.2 +0.2 +0.2 N.D.
stress Phosphomycin 0.005 mg/ml +0.3 +0.0 -0.1 -0.1 N.D.
carbon source NAG (C) -0.3 +0.1 +0.1 +0.2 N.D.
nitrogen source L-Glutamine (N) -0.2 -0.3 +0.4 +0.2 N.D.
motility outer cut, LB soft agar motility assay +0.1 -0.4 +0.3 +0.1 N.D.
nutrient D-Cellobiose (C); no added vitamins -0.3 +0.1 +0.2 +0.2 N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.2 -0.1 -0.1 +0.1 N.D.
stress Choline chloride 40 mM +0.2 -0.1 -0.1 +0.2 N.D.
nutrient D-Glucose (C); no added vitamins +0.0 -0.3 +0.3 +0.2 N.D.
stress Zinc 1.25 mM -0.1 +0.2 +0.1 +0.1 N.D.
nutrient D-Cellobiose (C); no added vitamins -0.1 -0.1 +0.2 +0.3 N.D.
nitrogen source L-Histidine (N) +0.3 +0.0 +0.1 +0.1 N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.4 -0.0 +0.1 +0.0 N.D.
carbon source D-Raffinose (C) +0.1 +0.1 +0.1 +0.2 N.D.
carbon source D-Maltose (C) +0.3 -0.0 +0.1 +0.1 N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.5 +0.0 +0.1 +0.2 N.D.
motility outer cut, LB soft agar motility assay +0.5 -0.1 +0.5 +0.0 N.D.
nutrient D-Glucose (C); no added vitamins +0.5 +0.1 +0.4 +0.3 N.D.
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Ga0059261_2029
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Ga0059261_2033
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