Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_2015 and Ga0059261_2016 overlap by 4 nucleotidesGa0059261_2016 and Ga0059261_2017 overlap by 16 nucleotidesGa0059261_2017 and Ga0059261_2018 are separated by 223 nucleotidesGa0059261_2018 and Ga0059261_2019 overlap by 4 nucleotides Ga0059261_2015: Ga0059261_2015 - maleylacetoacetate isomerase, at 2,112,605 to 2,113,231 _2015 Ga0059261_2016: Ga0059261_2016 - Outer membrane cobalamin receptor protein, at 2,113,228 to 2,115,231 _2016 Ga0059261_2017: Ga0059261_2017 - Glycosyltransferase, at 2,115,216 to 2,116,307 _2017 Ga0059261_2018: Ga0059261_2018 - hypothetical protein, at 2,116,531 to 2,117,469 _2018 Ga0059261_2019: Ga0059261_2019 - Uncharacterized protein conserved in bacteria, at 2,117,466 to 2,117,990 _2019
Group Condition Ga0059261_2015 Ga0059261_2016 Ga0059261_2017 Ga0059261_2018 Ga0059261_2019
stress Fusidic 0.0005 mg/ml -0.3 +0.1 -2.4 -1.1 -0.2
motility inner cut, LB soft agar motility assay -1.1 -0.3 -0.2 -0.1 -1.8
motility outer cut, LB soft agar motility assay -2.4 +0.0 +0.1 +0.2 -0.8
carbon source L-Glutamine (C) +0.1 -0.1 +0.3 +1.4 +0.5
carbon source D-Glucose (C) -0.0 -0.0 +0.4 +0.8 +1.1
stress A22 0.02 mg/ml -0.3 -0.0 +0.4 +1.4 +0.7
carbon source NAG (C) -0.0 +0.1 +0.8 +0.8 +0.8
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.8 -0.1 -1.5 +3.6 +1.3
carbon source L-Glutamine (C) +0.1 +0.0 +0.3 +1.2 +1.0
carbon source NAG (C) -0.3 +0.1 +1.1 +0.9 +1.1
nutrient L-Glutamic (C); no added vitamins +0.1 -0.1 +0.4 +1.7 +1.2
nutrient L-Glutamic (C); no added vitamins +0.2 +0.0 +0.4 +1.6 +1.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.4 -0.1 -1.5 +3.9 +1.6
nitrogen source L-Glutamic (N) +0.1 +0.0 +0.8 +1.5 +1.1
carbon source D-Maltose (C) -0.1 +0.0 +0.7 +1.9 +2.0
carbon source D-Fructose (C) -0.0 -0.0 +1.1 +1.6 +2.0
carbon source NAG (C) +0.1 +0.1 +1.0 +1.6 +1.9
stress Polymyxin B sulfate 0.1 mg/ml -0.5 +0.0 +1.6 +2.2 +1.8
carbon source NAG (C) -0.0 -0.0 +1.1 +1.9 +2.1
nitrogen source L-Histidine (N) -0.0 -0.1 +1.3 +2.3 +2.1
nitrogen source L-Glutamine (N) -0.1 +0.0 +1.1 +3.2 +1.8
carbon source D-Maltose (C) +0.1 -0.1 +0.7 +2.8 +2.7
nutrient D-Cellobiose (C); no added vitamins +0.3 -0.3 -0.4 +5.5 +2.8
nitrogen source L-Alanine (N) +0.1 +0.2 +1.2 +3.6 +3.1
nutrient D-Cellobiose (C); no added vitamins +0.7 -0.1 -0.1 +5.7 +2.5
nutrient D-Glucose (C); no added vitamins +0.1 -0.1 +0.1 +7.5 +4.6
nutrient D-Glucose (C); no added vitamins +0.6 -0.1 -0.1 +7.1 +4.7
nitrogen source L-Proline (N) +0.4 -0.0 +3.0 +6.5 +5.0
nitrogen source L-Glutamine (N) +0.2 +0.1 +4.6 +8.4 +6.1
nitrogen source L-Proline (N) +0.5 +0.1 +5.5 +9.6 +8.6
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