Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1966 and Ga0059261_1967 are separated by 111 nucleotidesGa0059261_1967 and Ga0059261_1968 are separated by 11 nucleotidesGa0059261_1968 and Ga0059261_1969 are separated by 30 nucleotidesGa0059261_1969 and Ga0059261_1970 are separated by 149 nucleotides Ga0059261_1966: Ga0059261_1966 - hypothetical protein, at 2,073,297 to 2,073,839 _1966 Ga0059261_1967: Ga0059261_1967 - Cytochrome B561, at 2,073,951 to 2,074,502 _1967 Ga0059261_1968: Ga0059261_1968 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,074,514 to 2,075,269 _1968 Ga0059261_1969: Ga0059261_1969 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 2,075,300 to 2,076,730 _1969 Ga0059261_1970: Ga0059261_1970 - Bacterial aa3 type cytochrome c oxidase subunit IV, at 2,076,880 to 2,077,005 _1970
Group Condition Ga0059261_1966 Ga0059261_1967 Ga0059261_1968 Ga0059261_1969 Ga0059261_1970
motility inner cut, LB soft agar motility assay N.D. -0.2 -0.1 -0.9 -0.1
motility inner cut, LB soft agar motility assay N.D. -0.2 -0.6 -0.6 +0.2
motility inner cut, LB soft agar motility assay N.D. -0.0 -0.2 -0.2 -0.5
motility inner cut, LB soft agar motility assay N.D. -0.1 -0.6 -0.3 +0.1
temperature LB 20C N.D. +0.0 -0.2 -0.5 -0.1
lb LB N.D. -0.1 -0.1 -0.2 -0.1
nitrogen source L-Glutamine (N) N.D. -0.3 -0.2 -0.1 +0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM N.D. -0.1 +0.1 -0.4 +0.0
carbon source a-Cyclodextrin (C) N.D. +0.2 -0.1 +0.1 -0.3
motility outer cut, LB soft agar motility assay N.D. -0.0 -0.3 -0.5 +0.8
nitrogen source L-Alanine (N) N.D. -0.1 -0.2 -0.2 +0.5
nitrogen source L-Glutamic (N) N.D. -0.2 -0.1 +0.1 +0.2
stress 1-ethyl-3-methylimidazolium lysine 2.5 mM N.D. +0.2 +0.1 -0.3 +0.2
nutrient D-Glucose (C); no added vitamins N.D. -0.3 -0.2 -0.3 +0.9
carbon source D-Glucose (C) N.D. -0.2 -0.1 +0.1 +0.3
nitrogen source L-Histidine (N) N.D. -0.2 -0.2 -0.1 +0.7
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins N.D. +0.0 +0.1 -0.1 +0.4
nitrogen source L-Proline (N) N.D. -0.2 -0.2 -0.0 +0.9
motility outer cut, LB soft agar motility assay N.D. +0.0 +0.1 -0.2 +0.5
carbon source D-Maltose (C) N.D. -0.1 +0.1 +0.2 +0.3
nutrient D-Cellobiose (C); no added vitamins N.D. -0.1 -0.2 -0.1 +0.9
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.1 +0.0 +0.0 +0.6
nutrient D-Cellobiose (C); no added vitamins N.D. -0.2 -0.2 +0.2 +0.8
carbon source D-Glucose (C) N.D. +0.0 -0.1 +0.3 +0.3
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.0 -0.1 +0.2 +0.5
carbon source NAG (C) N.D. +0.2 +0.1 +0.3 +0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.0 +0.1 +0.4 +0.3
nitrogen source L-Proline (N) N.D. +0.0 -0.2 +0.1 +1.1
nutrient D-Glucose (C); no added vitamins N.D. -0.1 -0.0 +0.0 +1.0
nitrogen source L-Glutamine (N) N.D. -0.2 -0.2 +0.3 +1.2
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