Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1951 and Ga0059261_1952 are separated by 11 nucleotidesGa0059261_1952 and Ga0059261_1953 are separated by 3 nucleotidesGa0059261_1953 and Ga0059261_1954 are separated by 26 nucleotidesGa0059261_1954 and Ga0059261_1955 are separated by 140 nucleotides Ga0059261_1951: Ga0059261_1951 - NADPH-glutathione reductase (EC 1.8.1.7), at 2,058,988 to 2,060,334 _1951 Ga0059261_1952: Ga0059261_1952 - Cupin domain, at 2,060,346 to 2,060,684 _1952 Ga0059261_1953: Ga0059261_1953 - Na+/H+-dicarboxylate symporters, at 2,060,688 to 2,062,019 _1953 Ga0059261_1954: Ga0059261_1954 - phosphoglucosamine mutase (EC 5.4.2.10), at 2,062,046 to 2,063,431 _1954 Ga0059261_1955: Ga0059261_1955 - Domain of unknown function (DUF4253), at 2,063,572 to 2,064,282 _1955
Group Condition Ga0059261_1951 Ga0059261_1952 Ga0059261_1953 Ga0059261_1954 Ga0059261_1955
nitrogen source L-Histidine (N) -3.6 +0.0 -1.2 N.D. +0.0
nitrogen source L-Alanine (N) -3.9 +0.1 -0.1 N.D. -0.0
nitrogen source L-Glutamine (N) -3.1 -0.1 +0.1 N.D. -0.1
nitrogen source L-Glutamine (N) -3.1 +0.0 +0.1 N.D. +0.2
nutrient L-Glutamic (C); no added vitamins -1.5 -0.3 -0.1 N.D. -0.1
nutrient L-Glutamic (C); no added vitamins -1.9 -0.1 -0.1 N.D. +0.0
nitrogen source L-Proline (N) -1.6 -0.1 -0.2 N.D. +0.1
stress Rifampicin 0.001 mg/ml -1.5 +0.0 -0.1 N.D. -0.2
carbon source L-Glutamic (C) -1.1 -0.4 -0.1 N.D. -0.1
motility inner cut, LB soft agar motility assay -1.8 +0.2 +0.0 N.D. -0.2
temperature LB 37C -1.7 +0.0 +0.0 N.D. +0.0
nutrient D-Glucose (C); no added vitamins -1.0 -0.1 -0.6 N.D. +0.1
pH LB, pH6 -1.4 -0.2 +0.0 N.D. -0.0
pH LB, pH6 -1.3 -0.3 +0.0 N.D. +0.0
carbon source D-Raffinose (C) -1.2 -0.3 -0.0 N.D. +0.0
nutrient D-Glucose (C); no added vitamins -0.8 -0.1 -0.4 N.D. -0.2
lb LB -1.1 -0.4 -0.0 N.D. +0.1
stress Cholin acetate 20 mM -1.7 +0.2 +0.0 N.D. +0.1
motility inner cut, LB soft agar motility assay -1.6 +0.3 -0.2 N.D. +0.0
motility inner cut, LB soft agar motility assay -1.3 +0.1 -0.0 N.D. -0.1
carbon source L-Glutamic (C) -1.1 -0.2 +0.0 N.D. -0.0
carbon source L-Glutamine (C) -1.4 +0.1 +0.2 N.D. -0.1
pH LB, pH6 -1.1 -0.4 +0.1 N.D. +0.2
nitrogen source L-Proline (N) -0.7 -0.2 -0.3 N.D. +0.2
stress Polymyxin B sulfate 0.1 mg/ml -1.2 +0.1 +0.0 N.D. +0.1
motility outer cut, LB soft agar motility assay -1.2 +0.6 -0.3 N.D. -0.1
stress 1-ethyl-3-methylimidazolium acetate 20 mM -1.2 +0.2 +0.1 N.D. +0.1
motility inner cut, LB soft agar motility assay -1.0 +0.3 -0.2 N.D. +0.2
stress nitrite 10 mM -1.0 +0.3 +0.1 N.D. -0.1
carbon source L-Glutamic (C) -0.8 +0.5 -0.1 N.D. +0.0
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