Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1941 and Ga0059261_1942 are separated by 63 nucleotidesGa0059261_1942 and Ga0059261_1943 overlap by 8 nucleotidesGa0059261_1943 and Ga0059261_1944 are separated by 155 nucleotidesGa0059261_1944 and Ga0059261_1945 are separated by 93 nucleotides Ga0059261_1941: Ga0059261_1941 - DNA damage response helicase, ligase-associated (from data), at 2,049,830 to 2,052,238 _1941 Ga0059261_1942: Ga0059261_1942 - putative efflux pump, required for thallium (I) resistance (from data), at 2,052,302 to 2,052,631 _1942 Ga0059261_1943: Ga0059261_1943 - NAD-dependent protein deacetylases, SIR2 family, at 2,052,624 to 2,053,340 _1943 Ga0059261_1944: Ga0059261_1944 - GTP-binding protein Era, at 2,053,496 to 2,054,398 _1944 Ga0059261_1945: Ga0059261_1945 - Ketosteroid isomerase-related protein, at 2,054,492 to 2,054,926 _1945
Group Condition Ga0059261_1941 Ga0059261_1942 Ga0059261_1943 Ga0059261_1944 Ga0059261_1945
stress Thallium(I) acetate 0.01 mg/ml +0.1 -4.1 -0.1 N.D. +0.2
stress Cisplatin 0.025 mg/ml -4.0 +0.2 +0.0 N.D. +0.0
stress Cisplatin 0.01 mg/ml -2.9 +0.1 +0.1 N.D. +0.1
motility inner cut, LB soft agar motility assay +0.1 -0.3 -0.3 N.D. -0.3
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.1 -0.1 -0.3 N.D. -0.1
nitrogen source L-Alanine (N) -0.1 -0.1 -0.3 N.D. -0.2
nitrogen source L-Glutamic (N) -0.1 +0.0 -0.2 N.D. -0.3
stress Thallium(I) acetate 0.005 mg/ml +0.1 -0.7 +0.0 N.D. +0.0
nitrogen source L-Glutamine (N) -0.1 -0.1 -0.2 N.D. -0.1
nitrogen source L-Glutamine (N) -0.0 +0.1 -0.4 N.D. -0.1
carbon source L-Glutamic (C) -0.1 -0.2 -0.1 N.D. +0.1
nutrient D-Glucose (C); no added vitamins +0.1 -0.3 +0.0 N.D. -0.1
nitrogen source L-Proline (N) -0.1 +0.1 -0.2 N.D. -0.1
stress acetate 40 mM -0.1 -0.3 +0.0 N.D. +0.2
stress Chlorite 1.25 mM -0.2 -0.2 +0.1 N.D. +0.2
motility inner cut, LB soft agar motility assay +0.2 -0.3 +0.1 N.D. -0.0
motility outer cut, LB soft agar motility assay +0.1 -0.4 +0.3 N.D. +0.0
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 -0.2 +0.2 N.D. +0.1
lb LB -0.1 +0.1 +0.2 N.D. -0.1
pH LB, pH6 +0.0 -0.1 +0.0 N.D. +0.3
stress Sisomicin 0.12 mg/ml -0.0 -0.1 +0.3 N.D. +0.1
stress nitrite 2.5 mM +0.1 -0.1 +0.1 N.D. +0.2
pH LB, pH7 -0.1 +0.3 +0.0 N.D. +0.1
pH LB, pH8 +0.1 +0.2 -0.2 N.D. +0.2
stress Tetracycline 0.002 mg/ml +0.1 +0.2 -0.1 N.D. +0.2
pH LB, pH7 -0.0 +0.2 +0.0 N.D. +0.3
motility inner cut, LB soft agar motility assay -0.1 +0.5 +0.1 N.D. -0.1
pH LB, pH7 +0.1 +0.1 +0.1 N.D. +0.3
stress Nalidixic 0.025 mg/ml +0.0 +0.2 +0.2 N.D. +0.0
motility outer cut, LB soft agar motility assay +0.0 +0.2 +0.4 N.D. +0.3
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