Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1896 and Ga0059261_1897 are separated by 155 nucleotidesGa0059261_1897 and Ga0059261_1898 are separated by 95 nucleotidesGa0059261_1898 and Ga0059261_1899 are separated by 163 nucleotidesGa0059261_1899 and Ga0059261_1900 are separated by 28 nucleotides Ga0059261_1896: Ga0059261_1896 - Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data), at 2,005,604 to 2,007,178 _1896 Ga0059261_1897: Ga0059261_1897 - Transcriptional regulators, at 2,007,334 to 2,008,080 _1897 Ga0059261_1898: Ga0059261_1898 - TonB-dependent receptor, at 2,008,176 to 2,011,028 _1898 Ga0059261_1899: Ga0059261_1899 - Lysophospholipase L1 and related esterases, at 2,011,192 to 2,012,067 _1899 Ga0059261_1900: Ga0059261_1900 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,012,096 to 2,012,848 _1900
Group Condition Ga0059261_1896 Ga0059261_1897 Ga0059261_1898 Ga0059261_1899 Ga0059261_1900
carbon source D-Xylose (C) -4.3 -0.1 +0.0 -0.0 -0.0
carbon source D-Xylose (C) -4.3 +0.0 +0.0 +0.1 -0.0
carbon source a-Cyclodextrin (C) +0.0 -0.7 +0.0 -0.0 -0.1
carbon source D-Maltose (C) +0.1 -0.6 -0.0 +0.0 -0.1
nitrogen source L-Proline (N) -0.1 -0.3 +0.1 -0.1 -0.2
nitrogen source L-Glutamine (N) +0.0 -0.6 +0.0 +0.1 -0.2
nitrogen source L-Glutamine (N) +0.0 -0.3 +0.1 -0.2 -0.1
nutrient D-Cellobiose (C); no added vitamins -0.4 +0.1 -0.0 -0.0 -0.2
nutrient D-Cellobiose (C); no added vitamins -0.3 +0.2 +0.0 -0.0 -0.4
carbon source a-Cyclodextrin (C) +0.1 -0.7 +0.0 +0.0 +0.1
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.2 -0.2 +0.0 -0.1 +0.1
motility outer cut, LB soft agar motility assay +0.1 +0.0 +0.2 -0.3 -0.3
stress Choline chloride 20 mM -0.1 -0.2 +0.0 -0.1 +0.1
carbon source NAG (C) -0.2 -0.3 -0.0 +0.1 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.1 +0.0 -0.2 -0.2
motility inner cut, LB soft agar motility assay -0.2 -0.1 +0.1 -0.3 +0.4
lb LB +0.1 -0.3 +0.1 -0.1 +0.1
nutrient D-Glucose (C); no added vitamins -0.3 +0.1 -0.0 +0.2 +0.0
stress acetate 20 mM -0.1 -0.2 +0.1 +0.0 +0.2
pH LB, pH7 -0.3 +0.2 +0.0 -0.0 +0.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins -0.0 +0.2 -0.0 +0.1 -0.2
carbon source L-Glutamine (C) +0.1 -0.2 -0.1 -0.1 +0.3
carbon source L-Glutamic (C) +0.2 -0.2 +0.1 +0.2 -0.0
stress Cobalt chloride 0.08 mM +0.2 +0.2 -0.1 -0.1 +0.1
motility inner cut, LB soft agar motility assay +0.4 +0.0 +0.2 -0.0 -0.2
nutrient L-Glutamic (C); no added vitamins -0.0 +0.4 +0.0 +0.0 +0.1
motility inner cut, LB soft agar motility assay +0.4 +0.3 -0.1 +0.3 -0.4
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.2 +0.1 -0.0 +0.2
motility inner cut, LB soft agar motility assay -0.1 +1.1 +0.2 +0.2 -0.5
motility outer cut, LB soft agar motility assay +0.6 -0.2 +0.1 +0.1 +0.2
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