Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1893 and Ga0059261_1894 overlap by 1 nucleotidesGa0059261_1894 and Ga0059261_1895 are separated by 2 nucleotidesGa0059261_1895 and Ga0059261_1896 are separated by 78 nucleotidesGa0059261_1896 and Ga0059261_1897 are separated by 155 nucleotides Ga0059261_1893: Ga0059261_1893 - Xylonolactonase (EC 3.1.1.68) (from data), at 2,002,726 to 2,003,613 _1893 Ga0059261_1894: Ga0059261_1894 - D-xylose 1-dehydrogenase (EC 1.1.1.175) (from data), at 2,003,613 to 2,004,392 _1894 Ga0059261_1895: Ga0059261_1895 - 2-keto-3-deoxyxylonate dehydratase (EC 4.2.1.141) (from data), at 2,004,395 to 2,005,525 _1895 Ga0059261_1896: Ga0059261_1896 - Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data), at 2,005,604 to 2,007,178 _1896 Ga0059261_1897: Ga0059261_1897 - Transcriptional regulators, at 2,007,334 to 2,008,080 _1897
Group Condition Ga0059261_1893 Ga0059261_1894 Ga0059261_1895 Ga0059261_1896 Ga0059261_1897
carbon source D-Xylose (C) -4.0 -5.1 -4.1 -4.3 -0.1
carbon source D-Xylose (C) -4.2 -5.4 -3.7 -4.3 +0.0
carbon source a-Cyclodextrin (C) -0.0 -0.3 -0.0 +0.1 -0.7
nitrogen source L-Proline (N) -0.2 -0.1 -0.1 -0.1 -0.3
carbon source NAG (C) -0.1 +0.1 -0.2 -0.2 -0.3
carbon source D-Maltose (C) +0.0 -0.1 -0.0 +0.1 -0.6
nutrient D-Cellobiose (C); no added vitamins +0.1 -0.4 +0.0 -0.4 +0.1
carbon source D-Glucose (C) -0.1 -0.4 -0.1 +0.0 -0.0
carbon source a-Cyclodextrin (C) -0.0 +0.1 +0.0 +0.0 -0.7
stress Cholin acetate 20 mM -0.0 +0.2 -0.2 -0.3 -0.0
nitrogen source L-Glutamine (N) -0.2 +0.4 +0.1 +0.0 -0.6
nutrient D-Cellobiose (C); no added vitamins +0.2 -0.3 -0.0 -0.3 +0.2
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.1 +0.2 +0.1 -0.2 -0.2
pH LB, pH7 -0.1 +0.1 -0.1 -0.3 +0.2
carbon source D-Fructose (C) -0.1 +0.2 +0.1 +0.1 -0.2
carbon source L-Glutamic (C) +0.1 -0.1 +0.1 +0.2 -0.2
carbon source L-Glutamine (C) -0.1 +0.2 +0.1 +0.1 -0.2
motility outer cut, LB soft agar motility assay -0.3 +0.4 -0.0 +0.1 +0.0
stress Dimethyl Sulfoxide 5 vol% -0.1 +0.4 +0.1 -0.1 -0.0
stress nitrite 5 mM -0.1 +0.3 -0.1 -0.2 +0.2
stress A22 0.02 mg/ml -0.1 +0.2 +0.1 +0.2 -0.2
motility inner cut, LB soft agar motility assay +0.0 -0.6 +0.1 +0.4 +0.3
nutrient D-Glucose (C); no added vitamins +0.1 +0.3 +0.1 -0.3 +0.1
stress Cobalt chloride 0.08 mM +0.1 -0.2 +0.0 +0.2 +0.2
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.2 -0.0 -0.1 +0.3
motility outer cut, LB soft agar motility assay -0.0 +0.3 -0.1 +0.6 -0.2
stress Cisplatin 0.01 mg/ml -0.1 +0.4 +0.0 +0.2 +0.2
nutrient L-Glutamic (C); no added vitamins +0.0 +0.3 -0.0 -0.0 +0.4
motility inner cut, LB soft agar motility assay -0.4 +0.3 -0.1 -0.1 +1.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.0 +0.3 +0.1 +0.1 +0.2
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